| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1922 |
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| Symbol | |
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| ID | 6110873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2150759 |
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| End bp | 2152342 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641621717 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001748794 |
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| Protein GI | 170721106 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.252712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCACACG CCAAGCATGG ACTGCGCCTG GACTTGCGCA CGCTGATCCT CATCCTTTGC
ACACTCACCG CCCTGGTGAT GCTCTGTGCC AGCTACTTCG CCAGCTACCG GGTGCAGCGC
CAGTTGCTCA TCGATAACGC CCTGGAAGCC AACCGGGTAT ATGCGGCGAA GCTGGCGGCA
ATCACCGAAA CCTTCATCGC GACTGCCTTG CAACAGCTGT CATTCAGCGC CAGTGTGCAG
GGGCGGCAAC TGGCCGACGG TGCGGCGCTG GAAGCAGAAA CCACACGGTT GCTGCGCCAG
AGCATGGCCT TCAACTCCAC CTTCGTGGTC GATGCCGAAG GTATCGTGAG GGCGATTTCA
CCCGCTGCGC TGCGTCATTA CCTTGGCCGC AAGGTACAGA CGCCCGGTAC TGAAGAGGCA
TTGCGCGAAC GCCGGCCCTT GGTGTCGACG CCTTACCTGT CGGCGGCCAA CAACCTGGTG
GTGGCGCTTT CGCAGCCGAT CTTCGATGCC AACGGCCGCT ACCTGGGCTA TGTCGGCGGC
AGCCTCTACC TGCGCGAACG CAACATACTC AACAGCCTGC TGGGCAAGCA TTTCTACAAG
GACGGCTCCT ACCTCTATGT AGTCGATCGC AACCGCCGCC TGCTCTATCA CCCCAATGCC
GAACGGGTAG GCAGCGTGGT CGAGGGCAAT ACCCTGATCG ACCAGCTGAA AGAACTGCAG
CACGGCACGC GGCAGGTCAT CAACAGCCAA GGGGTAGCCA TGCTGGCGGG CTTCGCCACA
GTGCCCAGTA CCGGTTGGGG CGTGGTCGCG CAACAACCGC TGGCGCAAAC GGTGGCGCCG
TTGAGTCATC TGATTCTCAC GGTCATGGGC ATCTCGGCCC CCCTGGCACT GGTGGGCAGC
CTGCTGCTGT GGTGGCTGGC GTTGACCATC GCCAGGCCAC TTTGGCAACT GGCCGCCGGT
GCCCGCACCA TGGACCGCAC CGGCACCGCC GAACGGCTGC ACAGGGTACA CGCCTGGTAC
TTCGAGGCCG CCGAACTCAA ACGGGCCATG CTGTTCGGCC TGAATCTGCT GCAAGAGCGC
ATCGGCCGGC TCAACCGCGA TGCCCAGACC GATCCGCTCA CCGGCCTGGG CAACCGCCGC
AGCCTGGAAT TCAAGCTGTC GCTGCTGGAG GCCGAAGGCC GCGCATTTTC AGTCATCGTG
CTGGATATCG ACCACTTCAA GCGGATCAAT GATGGGCATG GGCATGATGT CGGGGACCAG
GTGCTGCAGC GCTTGGCGGC AATCATGCGT GGCTGTTGCC GTGAAGGTGA CCTGCTGTGC
CGGACCGGTG GGGAGGAGTT CCTTATGCTG CTGCCTGGGG CCAGTGAGGC GGTCGCGACG
GCGGTCGCGC AGCGGCTGCG CGTGATGGTG CAGGACACCG CGATAGAACC GGTAGGCGCG
GTGACCATCT CACTGGGGGT GGCACATTGG CAGGCCGAGC AGGAACGCGA GCCGGGTGCA
GCGCTCAGCC AGGCGGATAG CGCGTTATAC CGGGCCAAGC GCGAAGGGCG AAATAGGGTG
TGCAGCGAAG CTGGCAGGCA TTGA
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| Protein sequence | MPHAKHGLRL DLRTLILILC TLTALVMLCA SYFASYRVQR QLLIDNALEA NRVYAAKLAA
ITETFIATAL QQLSFSASVQ GRQLADGAAL EAETTRLLRQ SMAFNSTFVV DAEGIVRAIS
PAALRHYLGR KVQTPGTEEA LRERRPLVST PYLSAANNLV VALSQPIFDA NGRYLGYVGG
SLYLRERNIL NSLLGKHFYK DGSYLYVVDR NRRLLYHPNA ERVGSVVEGN TLIDQLKELQ
HGTRQVINSQ GVAMLAGFAT VPSTGWGVVA QQPLAQTVAP LSHLILTVMG ISAPLALVGS
LLLWWLALTI ARPLWQLAAG ARTMDRTGTA ERLHRVHAWY FEAAELKRAM LFGLNLLQER
IGRLNRDAQT DPLTGLGNRR SLEFKLSLLE AEGRAFSVIV LDIDHFKRIN DGHGHDVGDQ
VLQRLAAIMR GCCREGDLLC RTGGEEFLML LPGASEAVAT AVAQRLRVMV QDTAIEPVGA
VTISLGVAHW QAEQEREPGA ALSQADSALY RAKREGRNRV CSEAGRH
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