Gene PputW619_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_1472 
Symbol 
ID6110401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp1610344 
End bp1611129 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID641621247 
Producthypothetical protein 
Protein accessionYP_001748346 
Protein GI170720658 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.246205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCAT TGTTGATGCA GGCGGATGAG GCCCTGATGA TCGAGTGGTT GATGTATATC 
GTGCTGGGCG CAGCCTTGGG CACCATGGGT GGGTTGTTCG GCATTGGCGG CGGCCTGATC
GCCATTCCGG CACTTGGTGT GCTGTTCGGG CTTGATCAGC AGTTGGCCCA AGGCACGGCC
TTGGTGATGG TGGTGCCGAA CGTGTTGCTG GCCCTGTGGC GTTATCACCA GCGCAACCGC
ATCGAGTTGC GCCATGCCTT GCCGTTGTCG GTGTGCAGCT TGGTGTTCGC CTGGTTGGGC
TCGATCTGGG CAGTGGGTAT CGATGCGCAG GCCATGCGCC TGGGCTTTGT CGGCTTTCTG
GTGGCGCTGG CCCTGTGGAA CGTGGCGCGT ATGTTTAACA AATCCGCCCC GGCAAGCCCG
GAGCTGCGCC ATCACTGGCC CTGGCTGGGG GTGCTGGGTT GCTTCAGTGG AACCATGGGC
GGTTTGTTCG GGGTGGGCGG CGCGGTGGTG GCTACGCCGA TCCTGACCAG CGTGTTCGGC
GCCACGCAGG TGGTGGCGCA AGGGCTGTCG CTGGCGCTGG CGGCGCCGAG CACCATGGTG
ACTTTGCTGA CCTATGGCGT GCACCACAGT GTCGACTGGG GGGTGGGGAT ACCGTTGGCA
GTCGGAGGCC TGCTCAGTAT CAGCTGGGGA GTGCGGCTGG CCCATGCGCT GCCAGAGAAG
GTGCTGCGGG CGATGTTCTG TGTATTTTTG GTGGTGTGCG CCGTGATGCT TGGATTTGAG
CTTTAG
 
Protein sequence
MLALLMQADE ALMIEWLMYI VLGAALGTMG GLFGIGGGLI AIPALGVLFG LDQQLAQGTA 
LVMVVPNVLL ALWRYHQRNR IELRHALPLS VCSLVFAWLG SIWAVGIDAQ AMRLGFVGFL
VALALWNVAR MFNKSAPASP ELRHHWPWLG VLGCFSGTMG GLFGVGGAVV ATPILTSVFG
ATQVVAQGLS LALAAPSTMV TLLTYGVHHS VDWGVGIPLA VGGLLSISWG VRLAHALPEK
VLRAMFCVFL VVCAVMLGFE L