| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1301 |
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| Symbol | |
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| ID | 6110229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 1440621 |
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| End bp | 1441811 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641621075 |
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| Product | integrase family protein |
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| Protein accession | YP_001748175 |
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| Protein GI | 170720487 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAA AGCCTGTGGA CCTGCCGGCC GGAGTCGAGC TTGTCGGGCG CTCAATCCGA
ATTCGCTTCA CCTGGAACAA GAAGCGGTGC TGCGAGACGC TCCCCCTCCC TCAGACCCCG
AAAGGGATCG CAGCAGCAGC GAGTCTACGT GCTCAAGTAA AGGGGCTGGA CAAGCTCGGC
GCCCTGACCG CAGAAAAGTA TGCCGAGCTT TTCCCCAATA CCCGCAGCGT GGTGGTGCAT
GAGCAAACTA CGCCGATCTT CTTCGATTAC GCGCAGGACT GGCTCAACAG CTTGCAAATC
GTGGAGGGTA CTCGGAAGAA CTACCGCTCT GCTCTGCAGG TGTATTGGGT TCCTTACCTG
GCCGATAAGC CGATCGACAC CATCACGTCA GTGCTCCTGC GCAAGATCAT GAACGATATC
AAGTGGACTT CCCCGGTACG CCGCAAGGGC GTGGTCGGCC TGCTGGTGTC GATCTTCCAG
CAGGCGGTGA CGGACGAGTT GATTGTTCGA AACCCGGCCC TGTCTATCCC AGGCGCCAAA
GTGCCGAAGC GTGAGGTCGA CCCTTTCACC AAAGAGGAAG CGGATTCGAT CATTGCTCAT
CTGTACGAAA CGACGAGCGG CATGACGGCA ATTTACGCCG CCTATTTCGA GTTCTGTTTC
TACACCGGCA TGCGGCCGGG CGAGGTGATG GCTCTGCGCT GGAGCGAGAT CGACAGGCGC
GTAAAGACTG CCAACGTTTG CCGCATTCAG ATCCGTGGAG TGATCCAGGA TCGCACCAAA
ACGAAGCGTT CCCGAAAAGT TTTATTGAAC GATCGCGCCC TGCATGCGCT CGAAAAAGCC
AGACCGCTCA CCGAGGCCCG TTCAGATTAC GTGTTCGCGC CCAGTGGGAC AGGTGACCGC
TCGGAGATGT TCATTCGCTC TGAGACGAGT CAAAAACGCT ACTGGCTGGC AGCCCTGCGG
AAGCTTGGCA TCAGGCGCCG CAGGATGTAC GACACGCGCC ACACGTACGC GACCATGTGC
CTGATGGCCG GCATGAACCC GGCATTCATC GCCGCGCAAC TCGGGCATAG CGTGCAGGTG
CTGCTTTCTA CATACGCGAA GTGGATCAAC TCGCCGAATG ATTGGGCTGA GCTTGATAAG
CTGAAATCGC TGGAAAGTGG TACAAAAATG GTACGAGCTA AAAGCCAGTA A
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| Protein sequence | MDRKPVDLPA GVELVGRSIR IRFTWNKKRC CETLPLPQTP KGIAAAASLR AQVKGLDKLG
ALTAEKYAEL FPNTRSVVVH EQTTPIFFDY AQDWLNSLQI VEGTRKNYRS ALQVYWVPYL
ADKPIDTITS VLLRKIMNDI KWTSPVRRKG VVGLLVSIFQ QAVTDELIVR NPALSIPGAK
VPKREVDPFT KEEADSIIAH LYETTSGMTA IYAAYFEFCF YTGMRPGEVM ALRWSEIDRR
VKTANVCRIQ IRGVIQDRTK TKRSRKVLLN DRALHALEKA RPLTEARSDY VFAPSGTGDR
SEMFIRSETS QKRYWLAALR KLGIRRRRMY DTRHTYATMC LMAGMNPAFI AAQLGHSVQV
LLSTYAKWIN SPNDWAELDK LKSLESGTKM VRAKSQ
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