| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0982 |
|---|
| Symbol | |
|---|
| ID | 6109900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1083610 |
|---|
| End bp | 1084209 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641620746 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001747856 |
|---|
| Protein GI | 170720168 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | [TIGR00948] L-lysine exporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000248105 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAA GCTATCTGAA CGGCATGCTG GTGGCCTTCG GCCTGATCAT GGCCATTGGC
GCACAGAACG CCTTCGTCCT GGCGCAGAGC CTGCGTCGTG AACACCACCT CCCGGTGGCA
GCACTGTGCA TCGTCTGCGA CGCATTGCTG GTAGCCGCCG GGGTGTTCGG CCTGGCCACG
GTGCTGGCGC ATAATCCGAC GCTGCTGGCG ATTGCTCGCT GGGGTGGCGC GGTGTTTCTG
CTCTGGTATG GCGCCAAGGC GCTGCGCAGT GCATGCTCCA AACAGAGCCT GCAGCATCAG
CAAGGCCAAG GCATGCGCTC GCGGCGTGCG GTGCTGCTCA GTGCACTGGC CGTTACCCTC
CTGAACCCGC ATGTGTACCT GGACACTGTG TTGCTGATCG GCTCCCTAGG CGCCCAGCAG
ACAGTGCCGG GCGCCTATGT GGCAGGGGCC GCCAGCGCTT CGCTGCTATG GTTCTCGACT
TTGGCGATCG GTGCTGCATG GCTGGCGCCC TGGCTGGCCC GCCCGGCCAC TTGGCGGATG
CTCGACCTGA TGGTGGCAGT GATGATGTTC GCCGTGGCGG CGCAGTTGAT CTTTACTTGA
|
|---|
| Protein sequence | MWQSYLNGML VAFGLIMAIG AQNAFVLAQS LRREHHLPVA ALCIVCDALL VAAGVFGLAT
VLAHNPTLLA IARWGGAVFL LWYGAKALRS ACSKQSLQHQ QGQGMRSRRA VLLSALAVTL
LNPHVYLDTV LLIGSLGAQQ TVPGAYVAGA ASASLLWFST LAIGAAWLAP WLARPATWRM
LDLMVAVMMF AVAAQLIFT
|
|---|
| |