Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0894 |
Symbol | |
ID | 6109811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 988188 |
End bp | 989651 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641620658 |
Product | outer membrane efflux protein |
Protein accession | YP_001747768 |
Protein GI | 170720080 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAGAT GGCTCGTTTT TCTGTGCTCG GCGCTGCTGG GCGTTGCCGT ACTGGCTGCT GATCCGCTGC AGCCGCCTCG TGCGGACCAG GGCTTTGCGG TGTCGGCCAC TGCCTGGGCG GCCAGCGGGG GTGCCGAGGT ATCGCTGGAG CTGGCCGATG CCGTTGCCTT GGCCCTGCGC GACAACCGCG CCATCCGCAG TGCTTATCTT GAGCGCATCG CGCAGAAATT CGACCTGCGC GTGGCGCGTG ATCACTATGC CCCGCAGCTG TCATTCAAGG CACGCTACCT TGGCAATCGC AACAGTGATG ACCACTACCG CGAAGTCCAG CTCGCTCCGG CGGCGAGCCT GCTCACGCCC TACGGCACAC GGCTGAGCCT GGACTGGGCG TACGGCCAGA CACGCGCCGA CAGGGCTGGC GTACATTACC GCGATGGCGC CAACCTGATG GTGATACAGC CGCTGCTGCG CGGTGCCGGG CGCGAGGTGG CCAGTGCACC GCTACGCCAG GCGCTACTGG CCGAGCAGCT CAACCGGCTG GTGCTCAAAG ACCGCGTGGC TGAAGTGATC ACGCGCACCA TCCTGCAATA TCGCGAACTG CTTCACGCCC AGGAGCAGTT GCACATTGCC CAGCAGGCAC TGGCCCGGGC CCAGCAGTTG GTAGAGGTGA ACCAGGCGCT GATCGCTGCC GGGCGCATGG CCGCATTCGA CAAGGTTCAG GCCGAAGCCG AGGTGGCTGG GCAGGAGTTG GCGCTGGAAA GCAGCCGTAA TCAGCTCCAC GCAAGCCGGC TGGCGTTGGC CCAGGTGTTG GCAGTGGACC TAGCCACCCC TTTGCGAGCA GTGGAAAAGG CCCACGTCCA GCGCTTGCGG GTCGATACTG CGCAGGCACT GACCCAAGCC GAAGCGCTGC AGCCTGCGTA TCTGATGCAA GTGATCACGG GTGAGCAGGC GTTGATTGAG CTGCAGGTGG CACGCAATGA GCAATGGTGG GACGTGTCGC TGGTCGGCGG GGCCAGCCAG ACGCGCCAGC GCCCTGGCAA CCAGGCCGGC TGGGAGCACT ATGTAGGGCT GGAGCTGGAA ATACCGCTTG GAGACCTGAG CCGGCGTCAG GCCGAGGTAC GTGCCCGTGT GGCGGTCGAA AGGCAGCAGG TCAGCCTGGC CGAGGCGCGC CAGCAACTCC AGCGAGATGT GTTGACTGCA GTGCGCGATT CCCAGGTGCG TTGGCGCCAG CTGGAAATTG CCGCACGGGC GCTGGCGCTA TCGCGGCGCA AACTGGAGAT AGAGCAGGAA AAGCTCGCCG TCGGACGCTC GAGCAATTTC CAGGTGCTCA GCTTCGAAAG CGATTTGCGC CATGCACAGA GCGTCGAACT GGATGCCAGA ATTGCCTACC TCAATGGCCA GGCTGAACTC GACCGGACAC TGGGTACCAC GCTGGAAAGC TGGGCTGTGG CGCTCAATGA TTAG
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Protein sequence | MTRWLVFLCS ALLGVAVLAA DPLQPPRADQ GFAVSATAWA ASGGAEVSLE LADAVALALR DNRAIRSAYL ERIAQKFDLR VARDHYAPQL SFKARYLGNR NSDDHYREVQ LAPAASLLTP YGTRLSLDWA YGQTRADRAG VHYRDGANLM VIQPLLRGAG REVASAPLRQ ALLAEQLNRL VLKDRVAEVI TRTILQYREL LHAQEQLHIA QQALARAQQL VEVNQALIAA GRMAAFDKVQ AEAEVAGQEL ALESSRNQLH ASRLALAQVL AVDLATPLRA VEKAHVQRLR VDTAQALTQA EALQPAYLMQ VITGEQALIE LQVARNEQWW DVSLVGGASQ TRQRPGNQAG WEHYVGLELE IPLGDLSRRQ AEVRARVAVE RQQVSLAEAR QQLQRDVLTA VRDSQVRWRQ LEIAARALAL SRRKLEIEQE KLAVGRSSNF QVLSFESDLR HAQSVELDAR IAYLNGQAEL DRTLGTTLES WAVALND
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