Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0886 |
Symbol | |
ID | 6109803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 978584 |
End bp | 980011 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641620650 |
Product | Sel1 domain-containing protein |
Protein accession | YP_001747760 |
Protein GI | 170720072 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.488862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCCCC ACAAGAAAAG CGCAAGCCGG GGCCTCTGCG CCCTGGCCGC GGCGATCGCC TTGGCAGGCT GTGCGGGCCT GCCCGACCAG CGCCTGGCCA ACGAAGCCCT CAAGCGCGGT GACACCGCGC TGGCCGAGCG CAACTACAAG GCCCTGGCTG ACCTGGGCTA CAGCGACGCA CAAGTAGGCC TGGCCGACAT CAAGGTCGCT ACCCGCGACC CCTCGCAGCT CAAGGAAGCT GAGGCCACTT ATCGCGCTGC GGCGGCAACC TCGCCACGCG CCCAGGCACG CCTCGGCCGC CTGCTGGTGG CCAAGCCCGA CAGCACCCAG GCCGAACGCG AAGAAGCTCA GACCCTGCTC AAGCTCGCCG CCAAGCAGGG CCAAGGCAAT ACCCTGATCC CGCTGGCGAT GCTTTACCTG ACCTACCCGC AGAGTTTCCC CAACATCAAT GCCCAGCAGC AGATCGACCA GTGGCGCGCT GCCGGCAACC CGGAAGCGGG CCTGGCCCAG GTGCTGCTGT ATCGCACCCA GGGCACCTAC GACCAGCACC TGGGTGAAGT CGAGAAGATC TGCAAGGCGG CGCTGAACAC CAGCGACATC TGCTACGTCG AGCTGGCCAC CGTGTACCAG AAACGCGGCC AGGCCGACCA GCAAGCCGCC CTGCTCGGCC AGCTCAAATC CGCTTATGCC CGCGGTGCGG TGCCTGCCAC TCGGGTCGAC AGCGTTGCCC GTGTACTGGC CGACCGTAGC CTGGGCCAGA CCGACGAAAA AACCGCCAAA GCGCTGCTGG AACAGGTCGC CCCGGCCAAT CCGGCTTCCT GGGTGAGCCT GGCGCAACTG GTCTACGACT TCCCGGAGCT GGGCGACACC GACCAGCTGA TGGCCTACAT CGACAAGGGC CGCGAAGCCG AACAGCCGCG TGCCGAACTG CTGCTCGGGC GCCTGTACTA CGAAGGCAAG ACCCTGCCAG CGGATGCCGA AAAGGCCGAA CACCACCTGC AGGCAGCTGC CGAGGCCGGC GAAGTCAGCG CCCACTACTA CCTTGGCCAG CTGTATCGCC GTGGCTACCT GGGCAACGTC GAGCCGCAAA AGGCCGTCGA CCACCTGCTC AGCGCAGCCC GCGGTGGCCA GAACAGTGCC GACTATGCCC TTGCCCAGCT GTTCAGCGAA GGCCATGGCA TTCGCCCACA ACCTGGCAAC GCCTGGGTAT TCGCCCAGCT TTCGCAGGCC AACCCGACGC CGCAGTCCAG CGAACTGCTG CAGCAACTTG ACCAGCAACT CACACCAGAC CAGCGCAGCC AGGCACAGAG CCTGCTGGCG CAGGAAAAGC AAGCTCGCGG CAGCATGGCC CAAGGTAGCA ATAGCACCCT GGCCCTCGAG GCCCTGCAAG AAGACGAAAA AGAAGTAGAC GGTGAGGACT CGCTATGA
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Protein sequence | MIPHKKSASR GLCALAAAIA LAGCAGLPDQ RLANEALKRG DTALAERNYK ALADLGYSDA QVGLADIKVA TRDPSQLKEA EATYRAAAAT SPRAQARLGR LLVAKPDSTQ AEREEAQTLL KLAAKQGQGN TLIPLAMLYL TYPQSFPNIN AQQQIDQWRA AGNPEAGLAQ VLLYRTQGTY DQHLGEVEKI CKAALNTSDI CYVELATVYQ KRGQADQQAA LLGQLKSAYA RGAVPATRVD SVARVLADRS LGQTDEKTAK ALLEQVAPAN PASWVSLAQL VYDFPELGDT DQLMAYIDKG REAEQPRAEL LLGRLYYEGK TLPADAEKAE HHLQAAAEAG EVSAHYYLGQ LYRRGYLGNV EPQKAVDHLL SAARGGQNSA DYALAQLFSE GHGIRPQPGN AWVFAQLSQA NPTPQSSELL QQLDQQLTPD QRSQAQSLLA QEKQARGSMA QGSNSTLALE ALQEDEKEVD GEDSL
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