| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0176 |
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| Symbol | |
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| ID | 6108955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 181116 |
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| End bp | 182654 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641619932 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001747051 |
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| Protein GI | 170719363 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000120124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAATT ACACAGAAGC TGGCCGCCCA CCCGATGTTG CCGATTCAGG CAGCACTCAG
CGCAGCAAAG GCTTGGCAAA AGGCCGTCTT GGCCTGTTGG CCAGCGTGGT GCTGGGCATT
TCCACAATCG CCCCGGTCTA TACCCTGACT GGGGCACTTG GCCCCACCGT GCGGGAGGTC
GGCGAGCACC TTCCGGCCGT CTTCATCGTC GGCTTCCTGC CCATGCTGCT GGTCGCCCTT
GGCTACCGTG AGCTGAACGC GGCGGAGCCC GACAGCGGTA CTTCCTTTAC CTGGTCGGCC
CGTGCCTTCG GCCCGATGAT CGGCTGGATC GGTGGCTGGG GGCTGGTCGT TGCCACCACC
ATCGTGTTGT CCAACCTGGC CGGGGTGGCC GTTGATTTTT TCTATCTGTT CCTGGCTCAG
ATCACCGGTA ACCAGGCGTT GGCTGCCTTA GCGGATAACC TGCTGATCAA CATCACCACC
TGTTGCGTGT TCATCGCCAT GGCGGTGTGG ATCTGTTGTC GCGGCATGGC TACCACCATG
ACCGTGCAAT ATGGTTTAGT GGCCTTGCAA CTGTTGGTGC TGATCGGCTT TGCCTTCGCC
GCTTTCAGTG AGACCACAGC ACCAGCGCCG CTGGAGTTCG ATCTGGCCTG GTTCAACCCC
TTCGGCGTGG AGTCGTTTTC GGCCTTTGCC GCTGGTCTGT CCTTGTCGAT CTTCATCTTT
TGGGGGTGGG ACGTGTGCCT GACCGTCAGT GAAGAATCGA TCGGCAGCGA CGAGGTGCCG
GGCAAAGCGG CGACCTGGAC CGTGCTGCTG ATTCTTGGTC TGTACCTGCT CACCGCCATC
GCCACCCTGC AATTCGCCGG GATCAGCGAG CAAGGGCTGG GGCTGAACAA CCCGCGTATC
CAGGAGAACG TCTTTGCCCA CCTGGCCGGG CCAGTCATGG GGCCGCTGGC GATCCTGATG
TCCATCGCAG TGCTGGCCAG CACCGCCGCT TCGCTGCAGT CGACCTTCGT CTCGCCGGCG
CGCACGCTGC TCGCCATGGG TTACTACGGT GCGGTACCAG AGCGCTTCGC CAAGGTTTGC
CCGCGTTCGC AGACGCCACG TTACGCAACC ATCTGTGCCG GCGTTGCCGC AGGCCTGTTC
TACGTGACCA TGCGTACCCT AAGCGAAAAC GTGTTGGCGG ACACCATCAC CGCCCTGGGC
ATGATGATCT GCTTCTACTA TTCGCTGACC GCGTTTGCCT GCGTGTGGTA TTTCCGCCAC
AGCCTTTTCG ACAGCCTGCG CCACTTCTGC ATGCGCGGCC TGTGCCCCTT GTTGGGTGGT
GTGATCCTGT CAGTGATCTT CGTGCGCACT GCCATCGACA GCGCGTCGCC GGATTTCGGC
AGTGGCTCGC ATGTGGCTGG CGTGGGGTTG GTGTTCGTGA TTGCGGCGAT CATTTCGGCA
CTGGGGATAG TGCTGATGAT GCTGTCGCGG ATGCGCGCGC CGGCTTACTT CCTGGGCGCT
ACCCTGCGAC AGCAGGCGAC CCTGCAGCTG CAGGAATAA
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| Protein sequence | MSNYTEAGRP PDVADSGSTQ RSKGLAKGRL GLLASVVLGI STIAPVYTLT GALGPTVREV
GEHLPAVFIV GFLPMLLVAL GYRELNAAEP DSGTSFTWSA RAFGPMIGWI GGWGLVVATT
IVLSNLAGVA VDFFYLFLAQ ITGNQALAAL ADNLLINITT CCVFIAMAVW ICCRGMATTM
TVQYGLVALQ LLVLIGFAFA AFSETTAPAP LEFDLAWFNP FGVESFSAFA AGLSLSIFIF
WGWDVCLTVS EESIGSDEVP GKAATWTVLL ILGLYLLTAI ATLQFAGISE QGLGLNNPRI
QENVFAHLAG PVMGPLAILM SIAVLASTAA SLQSTFVSPA RTLLAMGYYG AVPERFAKVC
PRSQTPRYAT ICAGVAAGLF YVTMRTLSEN VLADTITALG MMICFYYSLT AFACVWYFRH
SLFDSLRHFC MRGLCPLLGG VILSVIFVRT AIDSASPDFG SGSHVAGVGL VFVIAAIISA
LGIVLMMLSR MRAPAYFLGA TLRQQATLQL QE
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