| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_0098 |
|---|
| Symbol | |
|---|
| ID | 6109268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 106608 |
|---|
| End bp | 107156 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641619854 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001746973 |
|---|
| Protein GI | 170719285 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2910] Putative NADH-flavin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0000660133 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAATG CCGAAACCCC AGTATTCAAG CTGGTGCTGT TCGGGGCTGA AAGCAGCCTG
GGCAGTGCCC TGATGGTCGA GTTGCTGTCA CGTCAGCACG AGGTCACTGC CGTGGTCGAT
GACCTCAACC GCCATGCTCC GCGCCCGGGC CTGCATTTTA AGATAGGCGG GCTGGGTGAT
GCCGACCAGG CGGAGCAGGG CGCAGCAGGG GGCTCGGCGG TGATTGCCCT GTTGTCGGCG
CTGGCGTCGG GTGACCTTGC AGCGCAAGGT CGGATGAGCG AAGCGTTGGT GGCCGGGCTT
TCTCGCACGA CTATACGCCG GGTGCTGCTG GTGGGCGATT TTGATGTGCT GGATGCGCCG
GGCAAGTACA CCGAAGCGGA GCGTGAGTGC GTGGACCAGG TTGTGGATGC ACTGCAACGC
AGCCCTTTGC ACTGGACATT GATCAATGCG CCACAGGCAC TGATGGACCT GGAGCGAATG
GCGGCGGGGA TGGCCGATAT GCTCGAGCTG GATCTGCATC GGGGCGAGCA TCTGAACTTC
GTGACGTAG
|
|---|
| Protein sequence | MKNAETPVFK LVLFGAESSL GSALMVELLS RQHEVTAVVD DLNRHAPRPG LHFKIGGLGD
ADQAEQGAAG GSAVIALLSA LASGDLAAQG RMSEALVAGL SRTTIRRVLL VGDFDVLDAP
GKYTEAEREC VDQVVDALQR SPLHWTLINA PQALMDLERM AAGMADMLEL DLHRGEHLNF
VT
|
|---|
| |