| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5428 |
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| Symbol | |
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| ID | 5873243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6060471 |
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| End bp | 6061247 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550564 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001671645 |
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| Protein GI | 167036414 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAC GAAACACACC GCAGCGGCGG CACAACATCC TGGCTTTGCT CAGCGAGCAG
GGCGAGGTGA GCGTGGACGC CTTGGCCAAG CGTTTCGAAA CTTCGGAAGT GACCATTCGC
AAAGACCTCG CCGCCCTCGA AACCAACGGC CTGTTGCTGC GCCGCTACGG CGGCGCGGTA
CCGGTGCCGC AAGAACTGCT CGGTGAGCCG GCCCAGCCTG TGTCTTCCTA TAAGAAGGCC
ATTGCGCGTG CCGCCGTCGG GCGAATCCGC GAACATGCGC GCATCATCAT CGACAGCGGC
AGCACCACGG CAGCCATGAT CCCCGAACTG GGGCGCCAGC CGGGCTTGGT AGTAATGACC
AATTCGCTGA ATGTAGCCCG TGCCATTTGC GACCTCGAAC ACGAGCCGGT ACTGCTGATG
ACCGGTGGCA CCTGGGACCC GCATTCCGAA TCATTCCAGG GCCAAGTCGC CGAGCAGGTA
CTGCGCTCTT ACGATTTCGA CCAGCTGTTC ATCGGTGCCG ACGGCATCGA CCTCGGCCGG
GGTACTACTA CCTTCAACGA GCTGCTTGGG CTCAGTCGGG TCATGGCCGA AGTTGCCCGT
GAAGTGATCG TGATGGTCGA GTCGGACAAG GTGGGGCGCA AGATCCCTAA CCTCGAGCTG
CCCTGGGGCA GCGTACATAC CCTTATTACA GATGAACGCC TGCCTGCAGC GGCACGCGAA
CAAATTCAAG CCCGCGGCAT CAACCTGATC TGCGCCGCGA TCAGCCAGGA GCAATAA
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| Protein sequence | MSKRNTPQRR HNILALLSEQ GEVSVDALAK RFETSEVTIR KDLAALETNG LLLRRYGGAV
PVPQELLGEP AQPVSSYKKA IARAAVGRIR EHARIIIDSG STTAAMIPEL GRQPGLVVMT
NSLNVARAIC DLEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLGR
GTTTFNELLG LSRVMAEVAR EVIVMVESDK VGRKIPNLEL PWGSVHTLIT DERLPAAARE
QIQARGINLI CAAISQEQ
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