| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5335 |
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| Symbol | radC |
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| ID | 5873150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5959359 |
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| End bp | 5960039 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641550471 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_001671552 |
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| Protein GI | 167036321 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00550179 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCA GGGAGTGGCC GGCGGAAGAA CGGCCTAGGG AGAAGTTGTT GCAGCGAGGG
GCGGTGGTGT TGACGGACGC CGAATTGCTT GCCGTGTTGC TGGGCTCTGG CGTTGCCGGG
CGCAATGTGT TGGACCTTGC GAGGGGGCTG TTGGTGCGTT TCGGCGGGCT CAGGCAGTTT
CTTGAAGCTG AGCGCGAAGC GGTGTTACGT GAGCCAGGCA TTGGGATGGT GAAGTACGCA
CAGTTGCAGG CGCTGTTGGA GATTGGTCGG CGATATCTGG ACGAGAACAT CAAGCGCGCA
GCGGCTCTTG ACGGCCCGGC GGCGGTGCGG CGGTACCTCA AGGCCATGTT GCGCCATGAG
GTCAGTGAAG TTTTCGGTTG CCTGTTTCTC GACAGCAAGC ACAGGCCGTT GGCTTTCGAA
ATCCTGTTCA GGGGCACGAT AGACCGGGCA AGTGTCTACC CTCGGGAGGT GGTGCGGCGG
GCGTTGCTGC ATAACGCAGC GGCTTTGATC CTGTGCCACA ACCACCCTTC GGGTAGCAGT
GAGCCGAGCC AGGACGATGT GCATTTGACC CTGTCGCTGA AGAGGGGGCT GGCATTGATC
GATGTGCGGG TGCTGGACCA CATTATCATC GGCGACGGGG AGCCGTTGTC GATGGTCGAG
CATGGGTGGA TTGTGGCTTA G
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| Protein sequence | MNIREWPAEE RPREKLLQRG AVVLTDAELL AVLLGSGVAG RNVLDLARGL LVRFGGLRQF
LEAEREAVLR EPGIGMVKYA QLQALLEIGR RYLDENIKRA AALDGPAAVR RYLKAMLRHE
VSEVFGCLFL DSKHRPLAFE ILFRGTIDRA SVYPREVVRR ALLHNAAALI LCHNHPSGSS
EPSQDDVHLT LSLKRGLALI DVRVLDHIII GDGEPLSMVE HGWIVA
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