| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5117 |
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| Symbol | |
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| ID | 5872932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5722446 |
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| End bp | 5725754 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550255 |
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| Product | potassium efflux protein KefA |
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| Protein accession | YP_001671337 |
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| Protein GI | 167036106 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.666166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGC GCGCGTACCT TCGCACAGCC CTGCTCGGGC TGTGCCTGTC TCTTCCTTTT
GCGGCCTACG CGGCAGAAGC CCCGACCACC GCCAGCATTC AGAACAGCCT CGACAAGATC
GCCGAGCGCA AGCTGCCCGA GGCCGACCAG AAAGCCCTGC AGCAGGTGCT CGAACAAACG
TTGAGCCTGC TCGCCAGCAA GGAAGACAAC GAAAAGAAGC TTGCCGCGCT CAAGCAGCAA
CTGACCAGTG CGCCGAAAGA AACCAGCGAT AACCAGAAAG AACTGGCCAG GCTCAAGGAA
AGCAAAGCCC TGCCTGTCGC GCAGCGTTAC GCAACGCTGA CCGTGCCACA GCTCGAACAG
ATGCTCAGCG AGCGCAACAC CCAGCAGGGC GAGCTGCAAA AGGCGCTGTC CGAAGCCAAC
AGCCTGATCA TCAACTCGCA AACCCGCCCC GAGCGCGCCC AGGCCGAAAT CAGCAGCAGC
CAGACCCGCA CTCAGCAAAT CAACAACATC CTCAAAACCG GCAAGGACGG AGGCAAGTCC
ATCAATGCCG ACCAGCGCAA CCAACTCAAT GCCGAGCTGG CCTCGCTCAA CGCACTGACG
CTGCTGCGCC GCCAGGAACT GGCTGGCAAC AGCCTGCTGC AAGACCTCGG CAATGCGCGT
CACGACCTGC TGATCGAGCG CGCCGCGCGC CTGGAGCAGG AGATCCAGGA CTTGCAGACG
CTGATCAACG ACAAGCGCCT GGCTCAGTCC CAGGAGGCGG TCACCCAGCA GTCGATCGAG
GCGCAGAAGG CCGGCGGCAG CAGCCTGTTG GCCACCGAAA GCGCGGTCAA CCTCAAGCTC
TCCGACTACC TGCTCAAGAG CACCGACCGC CTCAACGAGT TGACCCAGCA GAACCTGCGC
ACCAAGCAGC AGCTCGACAG CCTGACCCAG GCCGACCAGG CGCTGGACGA GCAGATCAAC
GTGCTCAAGG GCAGCCTTTT GCTGTCGAAG ATCCTCTACA AACAGAAGCA GACCCTGCCG
CACCTGAAGG TAGACCGCGA CCTGGCCGAC CAGATCGCCG ACACCCGCTT GTACCAGTTC
GAGGTCAACC AGCAACGCGA GCAGATGAGC AGCCCGGTCA CCTACGTCGA CAAGCTGCTG
GCCGCGCAAC CGCAGGAAGA TGTGACTCCG CAGCTGCGCA AGGCCCTGCT GGAAGTGGCC
ATCACCCGCA GCGACCTGCT GGAGCGGCTG AACCGCGAGC TGTCGGCGTT GCTCAATGAA
TCGATCACCC TGCAGCTCAA CCAGAAGCAG CTGCTGGGCA CCGCGCAGAG CCTGCGCACC
ACCCTCGACG AACAGATGTT CTGGATCCCC AGCAACAAGC CGCTGGACTG GGACTGGCTG
CGTTATGTGC CAGAGCGCCT GGCCGACCAA GTTGCCAACC TGCCGTGGGG CTCGGGCCTG
AAGGAGCTGG CCGACGGCCT TAGCCAGCGC CCACTGTTGT TCCTGCCACT GCTGCTGGTG
ATCGGCGCCC TGCTGTGGCG GCGCAAGTAC CTGTACCAAC GGCTGGGCAA GGTGCACCAG
GACATCGGCC ACTTCCGCCG CGACAGCCAG TGGCACACGC CCCAGGCGAT TCTCATCAAC
ATCCTGCTGG CGATGCCGGT CAGCCTTGGC CTGGCACTGT GCAGCTACGC TTTGCAGATC
GACGCCCGTG GGCAGAATGC CAACCTGGGC GCCGCGCTCT GGCAACTGGC CCAGGCCTGG
CTGGTGTTCT ACACCGCCTA CCGCATTCTC GCCCCCGGTG GCGTGGCAGA AATTCACTTC
CGCTGGCACA AGCCACAGGT CGAGTTCCTG CGCGGCTGGG TACGCCGCCT GGGCACCGTG
GTGCTGGCGC TGGTTGGCGT GGTGGCAGTG GCCGAGCACC AGCCGTCGGC GCTGGCCGAC
GACGTGCTGG GCATCGGCGT GGTGCTGACC TGCTATGCGC TGATGGCCTG GCTGCTCAGC
CGCCTGCTGC TCAGCAGCCC CGCGCACCGT GACACCTCGT TGTTCCGCAG GGCCGTGGGC
GTAGCGTTCA CCGCCCTGCC CATCGCCCTG TTCGTTGCCG TGTGCTTCGG CTACTACTAC
ACCGCGCTGA AGCTCACCGA CCGGTTGATC TACACCCTGT ACCTGCTGCT GTTCTGGCTG
GTGATCGAGG CCGCGTTCGT GCGTGGCCTG TCGGTAGCGG CACGGCGCCT GGCCTACCAG
CGTGCGCTGA GCAAGCGTGC GGCGGCCAAG GAAGGGCTGG ACGGCGAGGT CATCACCGAA
GAGCCAACGC TGGACATCGA ACAGGTCAAC CAGCAGTCAC TGCGCCTGAT CCGCCTAGCC
CTGCTCGGCG GCTTCATCGC CGGCCTGTAC TGGGTGTGGT CAGACTTGAT CTCGGTGTTC
GCCTACCTCA ACAACTTCGT ACTGTACGAA TACACCAGCG GCACCGGCGC GGCCGCCAGC
ATGGTGCCTA TCAGCCTCGG CGACCTGCTG GGCGCGCTGG TGATCGTCGG CATCACCTTC
GCCCTGGCCG GCAACTTGCC GGGCCTGCTG GAAGTACTGG TGCTGTCACG CCTGAACCTG
GCCCAGGGCA GTGCCTACGC CACCACCACG CTGCTGTCGT ACACCATCGT CGGTGTCGGG
ATCGTCAGCA CCCTGTCGAC CCTGGGGGTG AGCTGGGACA AGCTGCAGTG GCTGGTGGCC
GCGCTGTCGG TGGGCCTGGG CTTCGGCATG CAGGAAATTT TCGCCAACTT CATCTCCGGC
ATCATGATCC TGTTCGAGCG CCCGGTGCGA ATTGGCGACA CCATCACCAT CGGCAACCTG
TCCGGCACGG TGAGCAAGAT CCGCATCCGC GCCACCACCA TCACCGACTT CGACCGCAAG
GACATCATCG TCCCCAACAA GACCTTCATC ACCGGCCAGC TGATCAACTG GTCGCTGACC
GACACGGTCA CCCGGGTGAC GCTGAAGCTG GGCATCGACT ACGGCTCCGA CCTCGACCTG
GTGCGCGAAC TGCTGCTCAA GGGCGCACAC GAGAACCCAC GAGTGCTCAA GGACCCAGAA
CCGATCGTGT ACTTCCTCAA CTTTGGCGAG AGCTCGCTGG ACCACGAGTT GCGCATGCAC
GTACGTGACC TGGGCGATCG CAACCCGACG CTGGACGAAA TCAACCGTTA CATCAACCGC
GAGTTCAAGG CACACAACAT CAAGATCTCG GTACGCCAGG TCGAGGTGTT CCTGATGGAC
CAGAAGGGCG GCAAACAGCA GCTTATTCCG CTGGAGCAAC CTAAGCCAGA TGGCACTGCA
CAGGCCTGA
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| Protein sequence | MSLRAYLRTA LLGLCLSLPF AAYAAEAPTT ASIQNSLDKI AERKLPEADQ KALQQVLEQT
LSLLASKEDN EKKLAALKQQ LTSAPKETSD NQKELARLKE SKALPVAQRY ATLTVPQLEQ
MLSERNTQQG ELQKALSEAN SLIINSQTRP ERAQAEISSS QTRTQQINNI LKTGKDGGKS
INADQRNQLN AELASLNALT LLRRQELAGN SLLQDLGNAR HDLLIERAAR LEQEIQDLQT
LINDKRLAQS QEAVTQQSIE AQKAGGSSLL ATESAVNLKL SDYLLKSTDR LNELTQQNLR
TKQQLDSLTQ ADQALDEQIN VLKGSLLLSK ILYKQKQTLP HLKVDRDLAD QIADTRLYQF
EVNQQREQMS SPVTYVDKLL AAQPQEDVTP QLRKALLEVA ITRSDLLERL NRELSALLNE
SITLQLNQKQ LLGTAQSLRT TLDEQMFWIP SNKPLDWDWL RYVPERLADQ VANLPWGSGL
KELADGLSQR PLLFLPLLLV IGALLWRRKY LYQRLGKVHQ DIGHFRRDSQ WHTPQAILIN
ILLAMPVSLG LALCSYALQI DARGQNANLG AALWQLAQAW LVFYTAYRIL APGGVAEIHF
RWHKPQVEFL RGWVRRLGTV VLALVGVVAV AEHQPSALAD DVLGIGVVLT CYALMAWLLS
RLLLSSPAHR DTSLFRRAVG VAFTALPIAL FVAVCFGYYY TALKLTDRLI YTLYLLLFWL
VIEAAFVRGL SVAARRLAYQ RALSKRAAAK EGLDGEVITE EPTLDIEQVN QQSLRLIRLA
LLGGFIAGLY WVWSDLISVF AYLNNFVLYE YTSGTGAAAS MVPISLGDLL GALVIVGITF
ALAGNLPGLL EVLVLSRLNL AQGSAYATTT LLSYTIVGVG IVSTLSTLGV SWDKLQWLVA
ALSVGLGFGM QEIFANFISG IMILFERPVR IGDTITIGNL SGTVSKIRIR ATTITDFDRK
DIIVPNKTFI TGQLINWSLT DTVTRVTLKL GIDYGSDLDL VRELLLKGAH ENPRVLKDPE
PIVYFLNFGE SSLDHELRMH VRDLGDRNPT LDEINRYINR EFKAHNIKIS VRQVEVFLMD
QKGGKQQLIP LEQPKPDGTA QA
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