Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5019 |
Symbol | |
ID | 5872834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5606667 |
End bp | 5607125 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550157 |
Product | cytochrome c' |
Protein accession | YP_001671239 |
Protein GI | 167036008 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAAGC GATTGACCGT TGTTGTTCTG GCCGCACTGG CCCTGGGCGG TGCCCTGAGT GGGTGCGATA GGGTCGACCC CAACTCGCCG CTGGGCAAGC GCAAGGTAAT TTTCAAGGAC ATGCTCAAGA CCAGCGAAGA CCTGGGCGGC ATGTTGCGTG GCCGGTTGCC GTTCGACGGG GTGAAATTTG CCGACGGTGC GTTGAAGCTG GACGGCCTTG CGCACCAGCC CTGGCAGCAC TTTCCACAGG TACGCGATGG GGGTGACAGC GCCGCCCGTG CCGAAGTATG GGTGCGTCAG GCGCGCTTTC ATGACCTGGC CCGTCAGCTG GAGGGTGTTA CCGGCGAACT GGTCGAGGTA ACCCGCAGCC AGCCGCTGGA TGCTGCGCAG TTGAAAGTGC CGATGGACAA GGTCGAAGCG GCTTGCAAGG CGTGCCATAC CGAGTTTCGT AATCATTGA
|
Protein sequence | MLKRLTVVVL AALALGGALS GCDRVDPNSP LGKRKVIFKD MLKTSEDLGG MLRGRLPFDG VKFADGALKL DGLAHQPWQH FPQVRDGGDS AARAEVWVRQ ARFHDLARQL EGVTGELVEV TRSQPLDAAQ LKVPMDKVEA ACKACHTEFR NH
|
| |