Gene PputGB1_5019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5019 
Symbol 
ID5872834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5606667 
End bp5607125 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content62% 
IMG OID641550157 
Productcytochrome c' 
Protein accessionYP_001671239 
Protein GI167036008 
COG category[C] Energy production and conversion 
COG ID[COG3909] Cytochrome c556 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGC GATTGACCGT TGTTGTTCTG GCCGCACTGG CCCTGGGCGG TGCCCTGAGT 
GGGTGCGATA GGGTCGACCC CAACTCGCCG CTGGGCAAGC GCAAGGTAAT TTTCAAGGAC
ATGCTCAAGA CCAGCGAAGA CCTGGGCGGC ATGTTGCGTG GCCGGTTGCC GTTCGACGGG
GTGAAATTTG CCGACGGTGC GTTGAAGCTG GACGGCCTTG CGCACCAGCC CTGGCAGCAC
TTTCCACAGG TACGCGATGG GGGTGACAGC GCCGCCCGTG CCGAAGTATG GGTGCGTCAG
GCGCGCTTTC ATGACCTGGC CCGTCAGCTG GAGGGTGTTA CCGGCGAACT GGTCGAGGTA
ACCCGCAGCC AGCCGCTGGA TGCTGCGCAG TTGAAAGTGC CGATGGACAA GGTCGAAGCG
GCTTGCAAGG CGTGCCATAC CGAGTTTCGT AATCATTGA
 
Protein sequence
MLKRLTVVVL AALALGGALS GCDRVDPNSP LGKRKVIFKD MLKTSEDLGG MLRGRLPFDG 
VKFADGALKL DGLAHQPWQH FPQVRDGGDS AARAEVWVRQ ARFHDLARQL EGVTGELVEV
TRSQPLDAAQ LKVPMDKVEA ACKACHTEFR NH