Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4905 |
Symbol | |
ID | 5872718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5472892 |
End bp | 5473848 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550041 |
Product | chaperone DnaJ domain-containing protein |
Protein accession | YP_001671125 |
Protein GI | 167035894 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00113006 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTTCA AAGACTATTA CAAGATACTC GGCGTAGAGC CCACGGCGGA CGACAAGGCG ATCAAGGCCG CGTACCGTAA GCTGGCGCGC AAGTATCACC CCGATGTCAG CAAGGAGCGC GACGCCGAGG ACAAGTTCAA AGAGGCCAAC GAGGCCTACG AAGTGCTGGG CGACGCGCAG AAACGTGCCG AGTTCGATGA AATTCGCAAG TACGGCGGCC AGCATGGCCG GCCGTTCCAG GCGCCACCGG GCTGGGAAAA CCGTGGCGGT GGCGGTGGCT TCGAAGGCGG CGATTTCTCC GACTTCTTCA GCTCGATCTT CGGTGGGCGC GGGGGCGGCA ACCCCTTCGG TGGCGCTCGG CAGCAGCAAC GCAGTGCAGG CAGGCGGGGG CAGGACGTGG AGCTTGAACT GGCAGTGTTC CTTGAAGAAA CCCTGAGCAA GGAGTCCAAG CAGATCAGCT TCCAGGTGCC GCAAACCAAT GCCATGGGCC AGCGCACCGG CTTTACCACC AAGACCCTGA ACGTGAAGAT TCCGGCCGGG GTGACCGACG GCGAGCGCAT TCGCCTCAAG GGCCAGGGCG CACCGGGCAG CGGTGGCGGG GCCAATGGCG ACTTGTTCCT GACCCTTCGC ATGGCGCCGC ACCCACTGTT CGATGTCGAA GGCCATGACC TGATCATCAC CGTGCCCTTG GCACCGTGGG AGGCTGCCCT GGGCGCCAAG GTGGCGGTAC CGACCCTGGA GGGCAAGATC AACCTGACCA TCCGCCCGGA CAGCCAGAGC GGGCAGCGCC TGCGCGTACC CGGCAAGGGC CTGGCGAACA AGCAGGGCGA GCGCGGCAAC CTTTACGCGC AGCTCAAAGT GGTGATGCCG ACCACGTCTG ACGAGTCTAC CCGTGAACTG TGGGCCAAGC TTTCCGAAAA GGCCGCGTTC AACCCGAGGG CACAATGGAG TAAGTGA
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Protein sequence | MDFKDYYKIL GVEPTADDKA IKAAYRKLAR KYHPDVSKER DAEDKFKEAN EAYEVLGDAQ KRAEFDEIRK YGGQHGRPFQ APPGWENRGG GGGFEGGDFS DFFSSIFGGR GGGNPFGGAR QQQRSAGRRG QDVELELAVF LEETLSKESK QISFQVPQTN AMGQRTGFTT KTLNVKIPAG VTDGERIRLK GQGAPGSGGG ANGDLFLTLR MAPHPLFDVE GHDLIITVPL APWEAALGAK VAVPTLEGKI NLTIRPDSQS GQRLRVPGKG LANKQGERGN LYAQLKVVMP TTSDESTREL WAKLSEKAAF NPRAQWSK
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