Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4887 |
Symbol | cbiD |
ID | 5872700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5454601 |
End bp | 5455695 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641550023 |
Product | cobalt-precorrin-6A synthase |
Protein accession | YP_001671107 |
Protein GI | 167035876 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.151074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGAAG AGACCCGCGA ACAGCCCGCG CCCCTGCGCA GCGGCCTGAC CACCGGCAGC TGCGCCACCG CCACCAGCCT GGCGGCCGCT CGCTTGCTGC TGAGCGGCGA AACCAGCGAT GCCGTCAGCA TTACCTTGCC CAAGGGCAAG GTGGTGCAGA TGCGCCTGGA GTTCTGCCGA TTAGCCGGCG AAAGCGCCGA AGCCGGCACA CTCAAGGACG CTGGCGACGA CCCGGACGTG ACCCACGGCG CCCTGCTCTA CAGCCAGGTG CGCTTGCTGG ACGAGCCAAG CATCCGCTTT GTCGCCGGCA GCGGTGTCGG CACCGTGACC CGGCCGGGGC TGGTGCTTGC GGTGGGTGAG CCGGCCATCA ACCCGGTGCC GCGCCGCATG ATCAGCGAGC ACCTGCAACG CCTGGCCGAC GAATGCGGCT ACTTCGGCGG CTTCGAGGTC ACGGTCAACG TGCAGGGCGG CGAACAGCTG GCACTCAAGA CCATGAACCC GCGCCTGGGC ATCCTCGGCG GGCTGTCGAT CCTCGGCACC AGCGGCATCG TGCGGCCGTT CTCCTGTGCG GCCTATATCG CCTCGATCCA CCAAGGTATC GACGTGGCCC ACACCAACGG CTACACGCAT ATCGCCGCCT GCACTGGCAA CGCCAGCGAA GACACCATGC GCCGGGTCTA CGGCCTGCCG GAAATCGCCC TGATCGAAAT GGGCGACTTT GTCGGCGCGG TGCTCAAGCA CCTGCGCAAG GTGCCGGTGC CGCGCCTGAC CCTGTGTGGT GGTTTTGGCA AGATCAGCAA ACTGGCCGCC GGGCACATGG ACCTGCACAG CCGCCATTCC AGCATCGATC TGCCGCAACT GGCGGGCTGG GCCGCAGACA TTGGTGCTGA CGCAGCGCTG CAGGCCGCCA TCATCGGCGC CAACACTAGC CAGCAAGCGC TCGCGCTGGC GCATGCGGCC GGCATTGCCC TCGGGGACGC GGTATGCGCC CACGCCCTGG CGTTCGCCCG CAGCGTGGTG CCGGCGCAGG TGCAAGTGGA AGTGTTCGCC ATCGACCGCC AAGGCGGTAT CGTTGGCCGG GCAGGTGTGC AATGA
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Protein sequence | MREETREQPA PLRSGLTTGS CATATSLAAA RLLLSGETSD AVSITLPKGK VVQMRLEFCR LAGESAEAGT LKDAGDDPDV THGALLYSQV RLLDEPSIRF VAGSGVGTVT RPGLVLAVGE PAINPVPRRM ISEHLQRLAD ECGYFGGFEV TVNVQGGEQL ALKTMNPRLG ILGGLSILGT SGIVRPFSCA AYIASIHQGI DVAHTNGYTH IAACTGNASE DTMRRVYGLP EIALIEMGDF VGAVLKHLRK VPVPRLTLCG GFGKISKLAA GHMDLHSRHS SIDLPQLAGW AADIGADAAL QAAIIGANTS QQALALAHAA GIALGDAVCA HALAFARSVV PAQVQVEVFA IDRQGGIVGR AGVQ
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