Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4845 |
Symbol | |
ID | 5872658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5411478 |
End bp | 5412239 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641549981 |
Product | hypothetical protein |
Protein accession | YP_001671065 |
Protein GI | 167035834 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCC GATTTTTCAT CAAACAATGG CTGATGCCTC CGGGCGTCTT GTTCCTGCTG CTGCTTGCGG CTTGGTGGCT GCGTACGCGG CGGCCACGGC TGGCGGTGCT GTGCTTTGCC GTGGGGTTGG GTGGCCTATG GTTGATGAGC CTGCCGCTGG TGGTGCAGGA AACGGCTCGG CAACTGGAAA CCGAGCCGCC ACTGGTGGTG GACGACTGGG CAGGCCTGGC GAGCCGGGCC GATGCCATTG TGGTGCTGGG CGCGGGGCGC GAACGCGGTG ACCCGGCTTG GGGCGGCAGT GACCAGCCCA CCGCCACGGC ACTTGAGCGC ATGCGCTTTG CTGCGCGATT GGCCAAGGCC TCGGGCCTGC CAGTGTTGAC CAGTGGCGGG CTGCATTACG GCACGCCGCC CAGTGAGGCT CGGCTGATGG CTGATCGCCT GCAGGAAGAC TTCGCTGTCG CGGTGAAGTG GCGCGAAGAG GCCAGCCGCA CGACCTGGGA AAATGCCCAG CTGACGGCCA AGGTGCTGCA GCCGTTGGGG ATTCGCCGGG TGGTGCTGGT AACCCAGGCC TGGCACATGC AACGCTCGCG CTGGAGCTTT GAACAGGCGG GGTTCGAGGT GGTGCCGGCG CCGGTGGGGT TCCTGGGGCG CGATCATGCG CGGCCGTTTG CGGGCTTGTT GCCCGAGAGC CGGGCGATGT GGCAAAGCGG GCAGTTGTTC AATGAAGTGG TGGGGTTGGT GGGGTATCGG GTGTTCTATT GA
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Protein sequence | MPIRFFIKQW LMPPGVLFLL LLAAWWLRTR RPRLAVLCFA VGLGGLWLMS LPLVVQETAR QLETEPPLVV DDWAGLASRA DAIVVLGAGR ERGDPAWGGS DQPTATALER MRFAARLAKA SGLPVLTSGG LHYGTPPSEA RLMADRLQED FAVAVKWREE ASRTTWENAQ LTAKVLQPLG IRRVVLVTQA WHMQRSRWSF EQAGFEVVPA PVGFLGRDHA RPFAGLLPES RAMWQSGQLF NEVVGLVGYR VFY
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