Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4815 |
Symbol | |
ID | 5872629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5382289 |
End bp | 5384160 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641549953 |
Product | KAP P-loop domain-containing protein |
Protein accession | YP_001671037 |
Protein GI | 167035806 |
COG category | [R] General function prediction only |
COG ID | [COG4928] Predicted P-loop ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.678803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGGTTG ATAACGAGAC GGATACTGAC TTCCTCAATT TCTCAGGGGT AGCAGACACG GTCGCTGAGA TCATCTACTC AGCGAACGGC CGTCCGATTT CCATCGGCGT CTCTGGTGCC TGGGGCGCCG GCAAGTCGTC GATGATCAAG CTGATCCAGG CCTCCTTAAA AAACCCTCCC GAGCCAGGTG AAAAACCGGC CAAAGACTTC GTGTTCGTTG AGTTCAATGC CTGGCTGTAC CAAGGCTATG ACGATGCACG CGCAGCGCTG ATGGACGTGA TCGCATCGCA ACTGGAAGCT GAAGCAAAGG CCCGTAGAAA AGGTTTGGAA AAAGTTGCTG ATCTCGCCGC GCGGGTGAAT TGGCTGCGTG TCGCCAAGCT TGCCGGTAAT GGCATTGTAT CCCTCGCCAC AGGCATTCCA GCGCCTGGCT TGATACGCGA TGTAGTAGGA GTATACGACC GAGTCCGTTC TGGCGGGGTC GATCAAGACG CGATTGAGGC GGCGCACGAC TCCGTCGAAC AGGCGAAAGG TGAGGCGGAA AAGTTGTTCC GTAGCGCACC TCCGAGGAAG TCCCCTCCGA AAGAGATCCA AGCCCTCAGG GATAACTTTG AAGACATCCT CGACGAGTTG GGCGTCACGC TCGTGGTGCT CATAGATGAT CTGGATCGTT GCCTTCCCGA GACCACGATT TCCACACTTG AAGCTATCCG CCTCTTCCTG TTCCTGCGCA ACACGGCGTT TGTGATCGCT GCCGATAACG AGATGATCAA GCACGCGGTG CGTAAGCACT TCAGTGGCGT ACCGGATGAT TTCCTGGTCA CCAGCTACTT CGACAAGCTG ATCCAGGTGC CCATTCGTGT TCCTCCACTG GGTACCCAGG AGGTGAGGGC GTACATGATG ATGCTGTTCC TTGAGAACAG TGCGTTGCCG AAAGAGGTGC TCGAGGATAT CCGGCTGAAA GTACGCAGCC AGCTCCGTAC GACCTGGCAG GGCAATCGCG TGGATCGAGC CTTCATGCAG GGCTTGTACA AAGACTACCC CTCCGAACTA GTTGGCAAAT TCGACACTGC CGAGCGCTTG GCAGCAGTCA TGACTTCTGC CTCAGGTATT CAAGGCAACC CGCGACTCAT CAAGCGCTTC CTCAACGCGC TGGCCATCCG CATGAGCATC TCTCGTGCCC AAGGCGTAGG AGTGGATGAA GCGGTGCTGG TGAAGCTGAT GCTGTTCGAG CGCAGCGGTA ATCCGAAGGC CTACGAAGAG CTGATGAAGG CAGTGGCTAC CGACAAACAC GGGAAGCCGG CCATGCTTCG AGACTGGGAA GACCATATAG ACAAAGGCAA AAACCTAGCT CTGTCTCAGC CTTGGGATCA GCCCTTTGTG AAGGAGTGGT TAGCTCTGCC TCCCGCTTTG GCAGACAAAG ATCTTCGTGG CGCGATCTAC GTGAGCCGTG AACATGCGCC GATCATTACT GATGAGGATC GACTGTCCTC CGAAGCAGCG GAGCTTTTGA CCGCTCTGCT TGAGATGCCT GAGATGGCGC CTCAGTTGAA AGAGCGTCTG GGAGCCCTTG CACCTGTTGA GATCAACGTT GTTATGGATC GCTTGCTGGA CAAAGCAGGT GGAGAACAGG AATGGGGTGT GCCAGACATT CTTGAAGCGA TGCTGGTTGT TGGAAGGCTT GATGCGCAAC AAGGGCTTCG GCTGGCTGCA TTTTTGAAGG AGCGTCCACC TGCGCAGATT CAGGCCGGTA TCGTGCCTAA ATTGAGCGAT GAAGCATGGG CGAAATCGGT CTGCGATTTC TGGCTGAGTG CCGACGTCGG CATGCCGGTA AAAACTGCGA TAAGGAAGTT GAATGGGAAC GTCACAAAAT AA
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Protein sequence | MWVDNETDTD FLNFSGVADT VAEIIYSANG RPISIGVSGA WGAGKSSMIK LIQASLKNPP EPGEKPAKDF VFVEFNAWLY QGYDDARAAL MDVIASQLEA EAKARRKGLE KVADLAARVN WLRVAKLAGN GIVSLATGIP APGLIRDVVG VYDRVRSGGV DQDAIEAAHD SVEQAKGEAE KLFRSAPPRK SPPKEIQALR DNFEDILDEL GVTLVVLIDD LDRCLPETTI STLEAIRLFL FLRNTAFVIA ADNEMIKHAV RKHFSGVPDD FLVTSYFDKL IQVPIRVPPL GTQEVRAYMM MLFLENSALP KEVLEDIRLK VRSQLRTTWQ GNRVDRAFMQ GLYKDYPSEL VGKFDTAERL AAVMTSASGI QGNPRLIKRF LNALAIRMSI SRAQGVGVDE AVLVKLMLFE RSGNPKAYEE LMKAVATDKH GKPAMLRDWE DHIDKGKNLA LSQPWDQPFV KEWLALPPAL ADKDLRGAIY VSREHAPIIT DEDRLSSEAA ELLTALLEMP EMAPQLKERL GALAPVEINV VMDRLLDKAG GEQEWGVPDI LEAMLVVGRL DAQQGLRLAA FLKERPPAQI QAGIVPKLSD EAWAKSVCDF WLSADVGMPV KTAIRKLNGN VTK
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