Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4655 |
Symbol | |
ID | 5872463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5194553 |
End bp | 5195494 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549788 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001670877 |
Protein GI | 167035646 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGCT ATCAATCACC GCATACCCCT GCCAAGGCCA ATCGTGTGAT AACCCGATCC GAAGAACTCC AGGTATTCGT CGCCGTCATC GACTGCGGCT CGATCTCCGC CGCCGCCGAC CAGATGGGCC AGACCCCCTC CGCCGTCAGC CGCACCCTGT CGCGGCTGGA AGGCAAGCTG GGCACCACGC TGGTCAACCG CACCACCCGG CGCATGGACC TGACCGAGGA GGGCCGTTTC TTCCTCGAGC GTTCGCGGCT GATCCTGGAG CAGATGGACG AGATGGAAGA GCGCCTCTCG ATGAACCGCC AGACCCCCTC CGGGCGGCTG CGCATCAACG CCGCTGCGCC GTTCATGCTG CATGCCATCC TGCCGTGGAT CGGCGAGTTC CGCCGCCAGT ACCCGGGCAT CGAGCTGGAG CTGAACACCG ACGACTTGAT CATCGACCTG CTGGAGCAGA GCACCGACGT GGCGATCCGC ATCGGTGAGC TGGCCGACTC CAGCCTGCAT GCGCGCAACC TGGGTTGCAG CCCCGTGCAG GTACTGGCCA GCCCTGCCTA CCTGGAGCAG CACGGCACAC CGCAGCGCGT CGAGGATTTG GCCAACCACT GCCTGCTCGG CTTCAGCCAG CCCGAATCGC TCAACCATTG GCCACTGCGC CACGCCCAGG GCGACCGCTT CAGCATCCGC CCGGCATTGC TCGCCTCCAG TGGCGAGACC CTGCGCCAGC TGGCGCTAGC CGGGGAGGGC ATCGTCAGCC TGTCGCATTT CATGACCCAC GAAGACATCC GCACCGGGCG CCTCCAAGTG CTGCTGGGCG AAGCCAATAA TGGCTACCGT CAGCCGATCC ACGCGGTCTA CTACCGCAAC ACCCAGCTGG CGCTGCGTAT CCAGTGCTTC CTGGACTTCA TCCAGCGCAA ATTGGCGATG TACGCCTGCT GA
|
Protein sequence | MTRYQSPHTP AKANRVITRS EELQVFVAVI DCGSISAAAD QMGQTPSAVS RTLSRLEGKL GTTLVNRTTR RMDLTEEGRF FLERSRLILE QMDEMEERLS MNRQTPSGRL RINAAAPFML HAILPWIGEF RRQYPGIELE LNTDDLIIDL LEQSTDVAIR IGELADSSLH ARNLGCSPVQ VLASPAYLEQ HGTPQRVEDL ANHCLLGFSQ PESLNHWPLR HAQGDRFSIR PALLASSGET LRQLALAGEG IVSLSHFMTH EDIRTGRLQV LLGEANNGYR QPIHAVYYRN TQLALRIQCF LDFIQRKLAM YAC
|
| |