| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4604 |
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| Symbol | |
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| ID | 5872412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5144145 |
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| End bp | 5145437 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641549737 |
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| Product | fumarylacetoacetase |
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| Protein accession | YP_001670826 |
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| Protein GI | 167035595 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00921508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA CTGCCAATGC CCGTAGCTGG GTCGAGCACG CCAACGGGCA CAGCGACTTC
CCGCTGCAGA ACCTGCCATT GGGCATCTTC AGCCGGCCGG GTGAAGCCCG GCGCTGTGGC
GTGGCCATCG GCGACGCGAT CCTCGACCTG GAAGCGGTGT TGGCCGCCGG CCTGTTCGCG
GGGGAAGCCA AGGCCGCCGT CGAGGCTACT CGGGGTGGGG CACTGAACGC TTACTTCGCA
TTGGGCCGCA GCGCCCGTGT CGCCCTGCGC GAGCGTCTGC AGGTGCTGCT TGGCGAGCAC
AGCGAGCACC AGGCTGCTCT GCAGCCGGCA CTGTATCCAG CCAGCGACTG CCAACTGCAT
GTGCCAGCGC AGGTCGGGGA CTACACCGAC TTCTACGTAG GCATCGAGCA CGCCAAGAAC
GTGGGCAAGC TTTTCCGCCC CGACAACCCG CTGCTGCCCA ACTACAAATA TGTGCCGATC
GGTTATCACG GCCGTGCCTC GACCATTCGC CCGTCCGGCA CCGATGTACG CCGGCCAAAA
GGCCAGACCC TCCCGGCTGG GCACACCGAG CCAAGTTTCG GCCCATGCGC ACGCCTGGAC
TACGAACTGG AACTGGGCAT CTGGATTGGC CAGGGCAATG ACATGGGCCA GGCGATCCCG
GTTGGCGATG CCGCCGAACA CGTAGCGGGC CTGTGCCTGC TCAACGACTG GTCGGCGCGC
GATATCCAGG CATGGGAATA CCAGCCATTG GGGCCGTTCC TGTCCAAGAG TTTCATCACC
AGCATATCGC CCTGGGTGGT TACCGCCGAA GCGCTGGAGC CGTTCCGCTG CGCCCAGCCT
GCACGCCCGG AAGGCGACCC GCAGCCGCTG TCGTACCTGC TGGACAAGCG TGACCAGGCC
GCCGGTGCAT TCGATATTGA ACTCGAAGTG TTGCTGCTGA CCGAGCGCAT GCGCGAGCAA
GGTGTTGCCC CGCACCGCCT GACCCTGAGC AACACCCGCA GCATGTACTG GACCGTGGCG
CAGTTGGTGG CGCACCACAG CGTCAACGGC TGCCAGCTGC AGCCGGGCGA CCTGTTCGGT
TCGGGCACGC TGTCGGGTGC TACGCCGGGT TCGTTCGGCA GCCTGCTGGA GATCACCGAA
GGCGGCAAGC TGCCGATTGA GCTGGCCAGC GGCGAGGTGC GCAAGTTCCT CGAAGACGGC
GACGAAATTA TCCTGCGTGC CCGCTGCACG CGTGACGGCG TAGCCAGCAT CGGCTTCGGC
GAATGCCGTG GCACGGTCAT CGCGGCCAAC TAA
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| Protein sequence | MNHTANARSW VEHANGHSDF PLQNLPLGIF SRPGEARRCG VAIGDAILDL EAVLAAGLFA
GEAKAAVEAT RGGALNAYFA LGRSARVALR ERLQVLLGEH SEHQAALQPA LYPASDCQLH
VPAQVGDYTD FYVGIEHAKN VGKLFRPDNP LLPNYKYVPI GYHGRASTIR PSGTDVRRPK
GQTLPAGHTE PSFGPCARLD YELELGIWIG QGNDMGQAIP VGDAAEHVAG LCLLNDWSAR
DIQAWEYQPL GPFLSKSFIT SISPWVVTAE ALEPFRCAQP ARPEGDPQPL SYLLDKRDQA
AGAFDIELEV LLLTERMREQ GVAPHRLTLS NTRSMYWTVA QLVAHHSVNG CQLQPGDLFG
SGTLSGATPG SFGSLLEITE GGKLPIELAS GEVRKFLEDG DEIILRARCT RDGVASIGFG
ECRGTVIAAN
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