Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4568 |
Symbol | algL |
ID | 5872376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5106767 |
End bp | 5107870 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549701 |
Product | poly(beta-D-mannuronate) lyase |
Protein accession | YP_001670790 |
Protein GI | 167035559 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTAT TGAAGCGAAT TTCCAGCCCC GCCCTGCTCG CTTTGGCCCT GTTTGGCGGT GCCGCGCACG CTGCGCTGGT ACCCCCGCAG GGTTACTACG AGGGGATCGA AAAGCTCAAG ACCGGCGACG GCAATTTCCG CTGCGAAGCG GCGCCCAAGC CGTACACCGG CGCGTTGCAG TTTCGCAGCA AATACGAAGG CTCTGACAAG GCGCGGGCAA CGCTCAATGT TGCCTCGGAA AAGGCCTTCC GCAAGTCGAC CGAAGACATC ACCACGCTTG AGAAAGGCGT GAGCAAGATG GTTGGCCAGT ACATGCGCGA TGGCCGCCCG GCGCAGCTCG ATTGCACCTT GGCCTGGCTG GGCACTTGGG CGCGCGCCGA CGCATTGCTG TCCACCGACT ACAACCACAC CGGCAAGTCG ATGCGCAAAT GGGCACTGGG CAGCATGAGC GGCTCGTGGC TGCGCCTGAA GTTCTCCCAC TCGCAGCCGC TGGCCGCGCA CCAGGCTGAA GCCGAAGTCA TCGAAAAATG GTTCGCCCGC CTGGCTGAAC AGACCGTGCG CGACTGGAGC GACCTGCCGC TGGAGAAGAT CAACAACCAC AGCTACTGGG CGGCCTGGTC GGTCATGGCG ACCGCTGTCG CCACCGACCG TCGCGACCTG TTCGACTGGG CCGTGAAGGA ATACAAGGTG GGCGCCAACC AGGTGGATGA CCAGGGCTTT CTGCCCAACG AAATCAAGCG CAAGCAGCGC GCACTGGCCT ACCACAACTA TGCCCTGCCG CCACTGGCGA TGATTGCCAG CTTTGCCCAG GCCAATGGCG TGGACCTGCG CAAAGAGAAC AACTTCGCCC TGCAGCGTCT GGGTGAAGGC GTACTGGCCG GTGCCCGCGA CCCGAGCCAG TTCAAGGCCC GCACCGGCGA GAAGCAGGAC ATGAAGGACC TCAAGGTCGA CAGCAAGTAT GCCTGGCTCG AACCCTGGTG CGAACTGTAC CACTGCGTCG GCGACACCCT GCAGCGCAAG CACGGCATGC AGCCGTTCAA CAGCTTCCGG CTGGGCGGCG ACCTGACCCG GGTCTACGAC CCGAACGCAG AGAGCAAGAA ATAG
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Protein sequence | MTLLKRISSP ALLALALFGG AAHAALVPPQ GYYEGIEKLK TGDGNFRCEA APKPYTGALQ FRSKYEGSDK ARATLNVASE KAFRKSTEDI TTLEKGVSKM VGQYMRDGRP AQLDCTLAWL GTWARADALL STDYNHTGKS MRKWALGSMS GSWLRLKFSH SQPLAAHQAE AEVIEKWFAR LAEQTVRDWS DLPLEKINNH SYWAAWSVMA TAVATDRRDL FDWAVKEYKV GANQVDDQGF LPNEIKRKQR ALAYHNYALP PLAMIASFAQ ANGVDLRKEN NFALQRLGEG VLAGARDPSQ FKARTGEKQD MKDLKVDSKY AWLEPWCELY HCVGDTLQRK HGMQPFNSFR LGGDLTRVYD PNAESKK
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