| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4549 |
|---|
| Symbol | |
|---|
| ID | 5872357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5083931 |
|---|
| End bp | 5084695 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641549682 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001670771 |
|---|
| Protein GI | 167035540 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG CGATCAAGCA GCCTGCTGGC CCCGAAGGCA TCATCCAGAT GCAGGGTGTG
AACAAGTGGT ACGGCCAGTT CCATGTGCTC AAGGACATCA ACCTGAATGT GCGCCAGGGC
GAGCGCATCG TGCTGTGCGG GCCGTCCGGC TCGGGCAAGT CCACCACCAT CCGCTGCCTC
AACCGCCTGG AAGAGCATCA GCAGGGGCGT ATCGTGGTCG ACGGGGTGGA GCTGACCAAC
GACCTCAAGC AGATCGAGGC TATCCGCCGT GAAGTGGGCA TGGTGTTCCA GCACTTCAAC
CTGTTCCCGC ACCTGAGCAT TCTGGAAAAC TGCACCCTGG CGCCGATGTG GGTGCGCAAG
ATGCCACGGC GCAAGGCCGA GGAAATTGCC ATGCATTACC TGGAGCGGGT GCGTATTCCG
GAGCAGGCGC ACAAGTACCC AGGGCAGTTG TCGGGTGGCC AGCAGCAGCG TGTGGCGATT
GCCCGTGCGC TGTGCATGAA ACCCAAGATC ATGCTGTTCG ATGAACCGAC CTCGGCGCTG
GACCCGGAAA TGGTCAAGGA AGTGCTCGAT ACCATGGTGG GCCTGGCCGA AGATGGCATG
ACCATGCTTT GCGTAACCCA CGAAATGGGC TTTGCCCGGA CTGTGGCGAA CCGGGTGATC
TTCATGGACA AGGGGGAGAT TGTGGAGCAA GCCGCGCCGG ATGACTTCTT CGACCGGCCG
CGCAGTGATC GGACCAAGTT GTTCCTCAGC CAGATCCTGC ACTGA
|
|---|
| Protein sequence | MSEAIKQPAG PEGIIQMQGV NKWYGQFHVL KDINLNVRQG ERIVLCGPSG SGKSTTIRCL
NRLEEHQQGR IVVDGVELTN DLKQIEAIRR EVGMVFQHFN LFPHLSILEN CTLAPMWVRK
MPRRKAEEIA MHYLERVRIP EQAHKYPGQL SGGQQQRVAI ARALCMKPKI MLFDEPTSAL
DPEMVKEVLD TMVGLAEDGM TMLCVTHEMG FARTVANRVI FMDKGEIVEQ AAPDDFFDRP
RSDRTKLFLS QILH
|
|---|
| |