| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4541 |
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| Symbol | |
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| ID | 5872349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5076193 |
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| End bp | 5077389 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549674 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_001670763 |
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| Protein GI | 167035532 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGACT CCCATAACAA CACCGGTTTT TCCACACGGG CCATTCACCA TGGCTACGAC
CCGCTTTCCC ACGGTGGTGC CCTGGTGCCA CCGGTGTACC AGACCGCTAC CTATGCCTTT
CCCACCGTTG AGTACGGCGC AGCCTGCTTC GCCGGGGAGG AGGCGGGCCA CTTTTACAGC
CGCATCTCCA ACCCCACCCT GGCCTTGCTC GAGCAACGCA TGGCTTCGTT GGAGGGCGGT
GAGGCGGGGC TGGCGCTGGC GTCGGGGATG GGCGCGATCA CTTCGACCAT CTGGACCTTG
CTGCGGCCTG GCGATGAACT GATTGTCGGG CGTACTTTGT ATGGCTGCAC GTTCGCTTTC
CTGCATCACG GCATTGGCGA GTTCGGGGTA AAGATCCACC ATGTCGACCT CAATGATGCC
AAGGCCCTGA AAGCGGCGAT CAACAGCAAA ACACGGATGA TCTACTTCGA AACGCCGGCC
AACCCCAACA TGCAACTGGT GGATATAGCG GCGGTCGTCG AGGCAGTACG AGGGCGTGAT
GTACTTGTGG TGGTCGACAA CACCTATTGC ACGCCGTACC TGCAGCGGCC GCTGGAGCTT
GGGGCGGACC TGGTGGTGCA TTCGGCGACC AAGTACCTCA GTGGCCATGG TGATATCACG
GCGGGCCTGG TGGTGGGGCG TAAGGCGCTG GTCGACCGCA TTCGCCTGGA GGGGCTGAAG
GACATGACCG GGGCGGTGCT GTCGCCGCAT GACGCGTCGC TGCTGATGCG CGGTATCAAG
ACCTTGGCCC TGCGCATGGA CCGCCATTGC GCCAACGCCT TGCAGGTGGC GCAGTTCCTC
GCGCGGCAGC CGCAGGTGGA ACTTATTCAC TACCCAGGTT TGCCGTCGTT CGCCCAATAC
GAACTGGCGC AGCGGCAGAT GCGCTTGCCG GGTGGGATGA TTGCCTTCGA GCTCAAGGGG
GGGATCGACG CCGGGCGGCG CTTCATGAAT GCGCTGCAGC TGTTTGCACG GGCGGTGAGC
TTGGGTGATG CCGAATCGCT GGCGCAGCAT CCGGCGAGCA TGACGCATTC CAGTTACACG
CCGCAGGAGC GGGCGCATCA CGGCATATCG GAAGGATTGG TGCGGTTGTC GGTGGGGCTG
GAGGATGTGG AAGACCTGCT GGCGGATGTC GAGCAGGCAT TGCAGGCTTG CAAATAG
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| Protein sequence | MRDSHNNTGF STRAIHHGYD PLSHGGALVP PVYQTATYAF PTVEYGAACF AGEEAGHFYS
RISNPTLALL EQRMASLEGG EAGLALASGM GAITSTIWTL LRPGDELIVG RTLYGCTFAF
LHHGIGEFGV KIHHVDLNDA KALKAAINSK TRMIYFETPA NPNMQLVDIA AVVEAVRGRD
VLVVVDNTYC TPYLQRPLEL GADLVVHSAT KYLSGHGDIT AGLVVGRKAL VDRIRLEGLK
DMTGAVLSPH DASLLMRGIK TLALRMDRHC ANALQVAQFL ARQPQVELIH YPGLPSFAQY
ELAQRQMRLP GGMIAFELKG GIDAGRRFMN ALQLFARAVS LGDAESLAQH PASMTHSSYT
PQERAHHGIS EGLVRLSVGL EDVEDLLADV EQALQACK
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