| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4523 |
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| Symbol | |
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| ID | 5872331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5061242 |
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| End bp | 5063059 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641549656 |
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| Product | LppC family lipoprotein |
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| Protein accession | YP_001670745 |
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| Protein GI | 167035514 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3107] Putative lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCTT GCCTGCGGCT GCTCACAGCC CTCTGCCTCG CCGCCCTGCT GGCAGCCTGC
GCCAGCTCGC CCTCATCCAG CCTGGGCGAA CTGCCACGCA CCCCGGACGC CAGCATCGAG
CAACTGCTCG AAAAAGCCGC TTCCAGCAAG TCTGCTGAAG ACGCGGCCCT GCTGCGCCTG
AGCGCGGCCG ACCTGGCCTA CAAGCAGAAG GATTTCCCAC GCGCCGCACG CATTCTCGAG
CAGGTTCCGC TGGACACGCT CAAGCCGGCC CAGCAAGTGT TCGCCAGCAC CCTCGCCGCC
GAGCTGGCCA TGAGCCGCAA CCAGCCCAAA GCGGCCCTGG CTGCCCTGGC CCACCCCAGC
CTGCAGCGCG TAGCTGAGCT GCCAAAGGAA CAGCAAGCGC GCACCTACAA CGTGCATGCC
GCCGCCCTCG AAGCCGACGG CCAGGCCTTG GCGGCCGCAC AACAGCGCGT GCTGCTGGCC
CCGCTGCTCA GCGGCCAGGC CGCCAGCGCC AACAATGACG CCATCTGGGC CCTGGTTGCC
TCACTGCCGG CAGAGCAACT GCAACAGCCA GCCAACGATC AGACCCTGGC CGGCTGGACC
AGCCTGGCCT TCGCCGTGAA AAGTGCAGGC ACCCTGGAAC AGCAACAAGC GGCCATCGAG
ACCTGGGTCA AACAACACCC GGACCACCCT GCCGCCCAGC AACTGCCGCT GGCGCTGACC
AAGCTCAAGG AACTGGCCAG CCAACCGCTG ACCAAGGTCG CCCTGCTGCT GCCTCAGGAG
GGCCCGCTGG CCGGTGTTGC CCGCGCCCTG CGTGACGGCT TCATGGCCGC TCACTTCCAG
GCCCAGCAAG CCGGCCAACC GGCACCTGCC GTGCAGGTGT TCGACAGCTC GCGCATCGGC
TCGCTCGATG ACTTCTATCG CCAGGCCCAG GCCGCCGGCG TGCAACTGGT CATCGGCCCG
CTGGAAAAGC CGCTGGTGAA GCAACTGGCC GCCAAACCGC AATTGCCGAT CACTACCCTG
GCCCTGAACT ACGCCGACGC CGGCCAGAAA GCCCCGCCGC AACTGTTCCA GTTCGGCCTG
GCTGCCGAAG ACGAAGCCCG CGAAGTAGCC CGCCGCGCCC GCGCCGATGG CATGGTCCGC
GCCGTGGCCC TGGTGCCGAG CGGTGAATGG GGCGACCGCG TACTGGCCGC CTTCCGTCAG
GACTGGGAAG GCAATGGTGG CACCCTGCTC GCCGCCGAGC GCATCGCCCA GCCGGTCGCC
CTGGCCCAGC AGATTGCCGA CCTGTTCCAA CTGCGCCAGA GCGAAGGCCG CGCCAAGAGC
CTGCAAAGCA CGGTAGGCGG CAGCATTGCC GCACAACCGT CGCGCCGCCA GGACATCGAC
TTCATTTTCC TCGCCTCGAC CCCACAGCAG GCCCAGCAGA TCAAGCCGAC CCTGAACTTC
CAGTACGCCG GTGACGTACC GGTCTACGCC ACCTCGAACC TGTACAGCGC CAGCGGTGAC
GTCAACCAGT ACAACGACAT GAACGGCATC CGCTTCTGCG AAACGCCGTG GCTGCTCGAC
ACCAGCAACA GCCTGCGCCA ACAGGTCGTA CAGCAGTGGC CACAGGCCGC TGGCAGCCTG
GGCCGTCTGT ATGCCATGGG CGTCGATGCC TACAGCCTGG CGCCACGCCT GGGCCAGCTG
AAAGCACTGC CGGACAACCG CGTCCTGGGC CTTTCGGGCA GCCTGAGCAT CAACGCCAAC
CAACGCGTCG AGCGCCAGCT GCCATGGGCC GAGTTTGCCG GCGGCCAGGT CAAGCGCCTG
CCTGACACCC CGCGCTGA
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| Protein sequence | MIACLRLLTA LCLAALLAAC ASSPSSSLGE LPRTPDASIE QLLEKAASSK SAEDAALLRL
SAADLAYKQK DFPRAARILE QVPLDTLKPA QQVFASTLAA ELAMSRNQPK AALAALAHPS
LQRVAELPKE QQARTYNVHA AALEADGQAL AAAQQRVLLA PLLSGQAASA NNDAIWALVA
SLPAEQLQQP ANDQTLAGWT SLAFAVKSAG TLEQQQAAIE TWVKQHPDHP AAQQLPLALT
KLKELASQPL TKVALLLPQE GPLAGVARAL RDGFMAAHFQ AQQAGQPAPA VQVFDSSRIG
SLDDFYRQAQ AAGVQLVIGP LEKPLVKQLA AKPQLPITTL ALNYADAGQK APPQLFQFGL
AAEDEAREVA RRARADGMVR AVALVPSGEW GDRVLAAFRQ DWEGNGGTLL AAERIAQPVA
LAQQIADLFQ LRQSEGRAKS LQSTVGGSIA AQPSRRQDID FIFLASTPQQ AQQIKPTLNF
QYAGDVPVYA TSNLYSASGD VNQYNDMNGI RFCETPWLLD TSNSLRQQVV QQWPQAAGSL
GRLYAMGVDA YSLAPRLGQL KALPDNRVLG LSGSLSINAN QRVERQLPWA EFAGGQVKRL
PDTPR
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