| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4384 |
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| Symbol | |
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| ID | 5872191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4910443 |
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| End bp | 4911882 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641549518 |
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| Product | integrase family protein |
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| Protein accession | YP_001670608 |
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| Protein GI | 167035377 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.666381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.543633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA ACCACCGCTC CCAAAGTGGG ACAAACCTGT TACAAACTGC GCTCGCCAAG
CCATACCACT ATCGCCGGTC TGGTCGCTAT TACCTTCGCC TTCGCCCGCA AGGAACCGTT
AAGGGCTTCT TCACGCTGTC ACTCAGGACC ACCGACAAGG CCACCGCAAT GACCATCTCA
GACGACATCC TTTCGACCCT CAAGGCCTAC CACTTGGACA ACCCAGAGGC GTCATGGGAT
GAACTGCGCG CGCGCCTGAC TGACTTCGCT GAGTACAACT TGACGATGGC ACACGGTGAC
AGCTCACTGG TCGCTTACGA GATGATCAAC GATGAGCATC ACTTGGCGTT GCGTAAGGCG
TCCGCAACGT TGCCTCTGAG TGTGAATCAG CAGCGGGCAG TCAGTAAGGC CCTTGAGATC
CTTGAGGCCT CTCAGGAGCG TATGCGGGGC CGTTCAGGGA AGCTGGTCGA GATCGTTAAG
GACCTCAACG ATGAACCTTG TGGCACGCCT GAAGCCCTCT TTCTCTCCCA ATCTGTAAAT
GCTTCTCCGG GTCTGACCTT TAAGTCTCTC TCTGCGCTCT ACATGGAGGA ACGCAAGGAC
AGCATTCAGG CCAGCACCAT GCGGGACGTG AAGTCATCGT GTGAGGCCAT CGGTGCGGTC
CTTGGTGACT TGGACATGAA GAGCCACACA CGGGAGGAGA TGAAGGGCCT ACGGGACAAG
CTCCTTGAGG ACCGTAAACC GTCGACGGTT AAGAAGCTGC TGACCCGGCT ATCGACGGTC
ATGGATTGGG CTGTGAATAA CGGCTATCTC GACAAGAGTT TCGACAAGGG TCTGAAGCCG
ACTAAGGGCG CTGACAGTTC GCGTGAGGCG CTCTCTCAGG CTCAGGTAAA GGCTCTGATG
ACCCATGCTA ATTCTCTACC AGTGGACGCA TGGCAGCGCT GGGCGTTGTC CCTTGGTGCG
ATCACTGGGA CCCGTATTGA GGAACTGAGG CAATTGACCA AAGCTGACGT TAAGCAGGTC
GGGGAAGTGT GGGTCATCGA CATTAATAGG AACGATGGCA AGACAGCCAA GACCAAGAAT
GCTCTGCGTG TCATACCGCT AACTGACGGG GCCTATGGGT TCGACCTTAA GGCGTTCCTT
GAGTTTGTCA GGAAGGCCGA CTCTCGGCTG TTCACCTTGG GAGCTGGTCA GTTCTCGAAC
GTGCTTAATG GGGCGCTACG GGATGTCTTG AGCTTGAAAG CTGATCGGAC CCAGACCTTC
CACTCGTTGC GTCACTCTCT GGCCGGTGCC CTGAAGGCCG CTGAGGTGCC TGTGGGGACC
GCTGAGTCCA TCTTGGGGCA CGCCTCGGGG TCGATCAGTT ATGACCTGTA CGGGGCTGGG
AGTGCGGTTG AGGTAAAACG AATGGCCGAA GCTCTGATTG AGGCATTATC AGAAGGCTGA
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| Protein sequence | MTVNHRSQSG TNLLQTALAK PYHYRRSGRY YLRLRPQGTV KGFFTLSLRT TDKATAMTIS
DDILSTLKAY HLDNPEASWD ELRARLTDFA EYNLTMAHGD SSLVAYEMIN DEHHLALRKA
SATLPLSVNQ QRAVSKALEI LEASQERMRG RSGKLVEIVK DLNDEPCGTP EALFLSQSVN
ASPGLTFKSL SALYMEERKD SIQASTMRDV KSSCEAIGAV LGDLDMKSHT REEMKGLRDK
LLEDRKPSTV KKLLTRLSTV MDWAVNNGYL DKSFDKGLKP TKGADSSREA LSQAQVKALM
THANSLPVDA WQRWALSLGA ITGTRIEELR QLTKADVKQV GEVWVIDINR NDGKTAKTKN
ALRVIPLTDG AYGFDLKAFL EFVRKADSRL FTLGAGQFSN VLNGALRDVL SLKADRTQTF
HSLRHSLAGA LKAAEVPVGT AESILGHASG SISYDLYGAG SAVEVKRMAE ALIEALSEG
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