Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4363 |
Symbol | |
ID | 5872170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4888934 |
End bp | 4889326 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549497 |
Product | putative lipoprotein |
Protein accession | YP_001670587 |
Protein GI | 167035356 |
COG category | [S] Function unknown |
COG ID | [COG5513] Predicted secreted protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.144177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0276166 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCC CTCGTCTGCT CGTTCCCCTG AGCTTCGCCC TGCTTTCTGC CTGCGCACAT CAACCTTCGC AGCCCGTCGA TCTGGACGCG GAAAGCGAGT GCCCCAAGCG CCTGCAAGTC GGCCAGATCC TGACCCTGAC CCTGCCCAGC AACCCCTCCA CCGGCTACCG CTGGCGTGTT CAGGATGCAG CCTCAAGCGT GCTGCACAGC GTCGGCTCAG AGGTGTACAG TGCCCCGGAA GAAGAGGGTG TGGTCGGCAG CGCCGGTGTC TCCACCTGGC GCTTCCAAGC CAGCAACAGC GGGGATGCCC AACTGGTTCT GACCTACCAG CAGCCTTGGG CTGCTGATGT CGCCCCCGTG CAAACCTTCG ACTGCAAGAT TATCGTCCGC TAA
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Protein sequence | MTAPRLLVPL SFALLSACAH QPSQPVDLDA ESECPKRLQV GQILTLTLPS NPSTGYRWRV QDAASSVLHS VGSEVYSAPE EEGVVGSAGV STWRFQASNS GDAQLVLTYQ QPWAADVAPV QTFDCKIIVR
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