Gene PputGB1_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4363 
Symbol 
ID5872170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4888934 
End bp4889326 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID641549497 
Productputative lipoprotein 
Protein accessionYP_001670587 
Protein GI167035356 
COG category[S] Function unknown 
COG ID[COG5513] Predicted secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.144177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0276166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CTCGTCTGCT CGTTCCCCTG AGCTTCGCCC TGCTTTCTGC CTGCGCACAT 
CAACCTTCGC AGCCCGTCGA TCTGGACGCG GAAAGCGAGT GCCCCAAGCG CCTGCAAGTC
GGCCAGATCC TGACCCTGAC CCTGCCCAGC AACCCCTCCA CCGGCTACCG CTGGCGTGTT
CAGGATGCAG CCTCAAGCGT GCTGCACAGC GTCGGCTCAG AGGTGTACAG TGCCCCGGAA
GAAGAGGGTG TGGTCGGCAG CGCCGGTGTC TCCACCTGGC GCTTCCAAGC CAGCAACAGC
GGGGATGCCC AACTGGTTCT GACCTACCAG CAGCCTTGGG CTGCTGATGT CGCCCCCGTG
CAAACCTTCG ACTGCAAGAT TATCGTCCGC TAA
 
Protein sequence
MTAPRLLVPL SFALLSACAH QPSQPVDLDA ESECPKRLQV GQILTLTLPS NPSTGYRWRV 
QDAASSVLHS VGSEVYSAPE EEGVVGSAGV STWRFQASNS GDAQLVLTYQ QPWAADVAPV
QTFDCKIIVR