Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4288 |
Symbol | |
ID | 5872095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4799689 |
End bp | 4800834 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549422 |
Product | beta-lactamase |
Protein accession | YP_001670512 |
Protein GI | 167035281 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGATCC AGGGTCACTA TGAGCTGAAG TTCGAAGCCG TGCGCGAAGC CTTTGCCGCG TTGTTCGATG ATCCCCAGGA GCGTGGTGCC GCACTGTGCA TCCAGGTGGG GGGCGAAACC GTTATTGACC TGTGGGCCGG CAGTGCCGAC AAAGACGGCC AGCAGGCTTG GCACAGCGAT ACCATCGCCA ACCTGTTCTC CTGCACCAAG ACGTTCACCG CCGTCACCGC CCTGCAACTG GTCGGCGAGG GTAAGCTGGC CCTCGATGCC CCGGTGACCA ACTACTGGCC CGAGTTCGCC CAGGCCGGTA AGCAGTCGGT CACTTTGCGC CAACTGCTCA GCCACCGTGC CGGCTTGCCG GCGATTCGCG AGCTGCTGCC GGCCGAGGCA TTGTACGACT GGCAGACCAT GGTCGATGCC CTGGCGGCCG AGACACCTTG GTGGACACCC GGCACCGAAC ACGGCTATGC CGCCATCACC TACGGCTGGC TGATCGGCGA GCTGATTCGC CGCGCCGATG GCCGTGGCCC TGGCGACTCG ATCGTGGCCC GCACCGCCCG CCCGTTGGGG TTGGATTTCC ACGTTGGCCT GGCAGACGAA GAGTTCCACC GCGTGGCGCA TATCGCCCGT GGCAAAGGCA ACCCGGGGGA TGCCGCAGCG CAGCGCTTGC TACAGGTAAC CATGCGTGAG CCAGAGGCGT TGTCGACCCG TGCATTCACC AACCCGCCGG CGATCCTGAC CAGTACCAAC AAGCCTGAAT GGCGTCGTAT GCAACAGCCA GCGGCCAATG GCCATGGCAA CGCACGCAGC CTGGCGGGCT TCTATGCCGG GCTTCTTGAC GGCAGCCTGC TCGAATCTGA ACTGCTCGAT GAACTGACCC GTGAACACAG CCTGGGTCAG GACCGTACCT TGCTCACCCA AACCCGCTTT GGCCTGGGCT GCATGCTCGA CCAGCCCGAG GTGGCCAACG CCACCTTTGG CCTCGGCGCC CGCGCCTTCG GCCACCCCGG TGCCGGTGGT TCGGTCGGTT TTGCCGACCC GGAGCACGAT GTGGCCTTCG GTTTCGTGGT CAATACCCTC GGCCCTTATG TGCTGATGGA CCCACGCGCG CAAAAGTTGG TACGCGTCCT TGCCAGTTGC CTTTGA
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Protein sequence | MQIQGHYELK FEAVREAFAA LFDDPQERGA ALCIQVGGET VIDLWAGSAD KDGQQAWHSD TIANLFSCTK TFTAVTALQL VGEGKLALDA PVTNYWPEFA QAGKQSVTLR QLLSHRAGLP AIRELLPAEA LYDWQTMVDA LAAETPWWTP GTEHGYAAIT YGWLIGELIR RADGRGPGDS IVARTARPLG LDFHVGLADE EFHRVAHIAR GKGNPGDAAA QRLLQVTMRE PEALSTRAFT NPPAILTSTN KPEWRRMQQP AANGHGNARS LAGFYAGLLD GSLLESELLD ELTREHSLGQ DRTLLTQTRF GLGCMLDQPE VANATFGLGA RAFGHPGAGG SVGFADPEHD VAFGFVVNTL GPYVLMDPRA QKLVRVLASC L
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