| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4287 |
|---|
| Symbol | |
|---|
| ID | 5872094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 4798612 |
|---|
| End bp | 4799589 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641549421 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001670511 |
|---|
| Protein GI | 167035280 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCAC ATAAAACCTT AGCACTCGCC CTGTGCCTGA CCGCCGTTAC CGGCTGCGCC
AGCCACTCCC CGGACGGCTC CAAGGAAGGT GGCTCCAACT GGTGGCCTTT CGGTTCGGAC
AAGGTCGCCG AGCAGGAAGT GAAGGCAGCC GTCACTGAAA ACGTGGCCAA GGCTGACGCC
AAATCGGAGA GCGCCAGCCG TTGGTGGTGG CCGTTTGGTG GCGATGACAA GCAGGCCAAG
GGCCCCGTGG TGCCGAAAAT TGACCAGAAG GCCACCCAGG CCTGGCTGGA CGAATACGAG
CCTAAGCTGC GCGAAGCGAT CAAGGACAGC AAGCTGGAGC TTGAGCGCCG CGACAATGTG
CTGGCGGTAA CCTTGCCGGT TGACAGCTCG TACAACCCTG ACCGCCCGAA CATGCTGTTG
CCCATGACCC TCGGCCCGAT CACCCGCGTG GCCAAGACCG TCGAAGGTGA CCCCAAGACT
GCCGTGCTGG TACTGGGCCA TGCCGACAGC AGCGGTGCTG CCGCTGCCAA CCAGAAACTC
AGCCTGGAGC GCGCCGCTTC GGTATCGGCC ATCTTCCGCC TCAGCGGCCT GCAGCGTGAC
CGCCTGACCC TCAAGGGCAT GGGCTCGGTG ATGCCGCGTG CGGCCAATGA CAGCGCCGAG
GGCCGCTCCC TGAACCGCCG CGTGGAAATG CTGCTGACCC CACAAAACAC CATGGTCGCA
CTGTTGGCCA AGTATCAGCA GGCTGCTCCG GCACCTGCGC CGACCTCGAT GGTGGCGGTA
CAGGATGCCA AGGCACCTGC TGCCAAGGCC ACCGACAACA AGCCGGCTGC CAAGCCTGCG
GCGAAGAAGC CCGTGGCCAA GGCCAAAGCA CCTGTGAAGG CAACAGCCAA GAAGAAAGCG
GCGCCGGCCA AGCCTGTTGC CAAGAAAGCT ACCGCCGATA AAAAAGTAGC TGCCAATAGC
CCTGCGAAGA CCAACTGA
|
|---|
| Protein sequence | MSSHKTLALA LCLTAVTGCA SHSPDGSKEG GSNWWPFGSD KVAEQEVKAA VTENVAKADA
KSESASRWWW PFGGDDKQAK GPVVPKIDQK ATQAWLDEYE PKLREAIKDS KLELERRDNV
LAVTLPVDSS YNPDRPNMLL PMTLGPITRV AKTVEGDPKT AVLVLGHADS SGAAAANQKL
SLERAASVSA IFRLSGLQRD RLTLKGMGSV MPRAANDSAE GRSLNRRVEM LLTPQNTMVA
LLAKYQQAAP APAPTSMVAV QDAKAPAAKA TDNKPAAKPA AKKPVAKAKA PVKATAKKKA
APAKPVAKKA TADKKVAANS PAKTN
|
|---|
| |