Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4283 |
Symbol | nhaA |
ID | 5872090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4795741 |
End bp | 4796916 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641549417 |
Product | pH-dependent sodium/proton antiporter |
Protein accession | YP_001670507 |
Protein GI | 167035276 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAGCC TGTTCACCCG TTTTTTCCAG CTTGAAGCCG CCAGCGGCCT GCTGCTGATC GCCGCCGCCG TTCTGGCCCT GATCATCAAC AACTCGCCAC TGTCCTACCT GTACAGCGGG CTGCTCGACG TGCCCGTCGC CGTCCAGATC GGCGCGCTGA ACATCGCCAA GCCATTGCTG CTATGGATCA ACGATGGCCT GATGGCCCTG TTCTTCCTGC TGATCGGCCT GGAGGTCAAG CGCGAGGTGG TCGACGGCCA CCTGTCCAAG CCATCCCAGG TCATCCTGCC TGCCACTGCT GCCGTTGGCG GCATGGTGGT GCCGGCACTG ATCTACTGGT TCATCAACCG TGACAACCCG GCGGCCGTGG CCGGCTGGGC GATCCCAACT GCCACCGACA TCGCCTTTGC CCTCGGCGTG CTGGCGCTAC TGGGCAAGCG CGTGCCGGTG TCACTGAAGC TGTTCCTGAT GACCCTGGCG ATCATCGACG ACCTGGGTGC GATCATTGTC ATCGCCCTGT TCTACTCCGG TACCCTGTCG AGCGTATCGC TGCTGCTGGC GGCGGCCTGC CTGGTGGTGC TGATAGCGAT GAACCGGCTT GGCGTGGTCA AGCTTGGGCC ATACATGGTC ATTGGCCTGA TCCTCTGGGT ATGCGTGCTC AAGAGTGGCG TGCATGCCAC CCTGGCCGGT GTCGCCCTGG CCTTGTGCAT CCCACTGCGC ACGCGCAACG CCGAAACGTC ACCGCTGCTG GCCCTGGAAC ATGCCCTGCA CCCTTGGGTG GCCTATGCCA TCCTGCCACT GTTCGCCTTC GCCAACGCCG GCGTTTCGCT GGCTGGCATG ACCGTAGAAA GCTTCACCCA CCCCGTGCCG ATGGGCATCG CCGTCGGCCT GTTGCTGGGC AAAACCGTAG GTGTTTTCGG CCTGACATGG CTGGCGGTGA AGCTGCGCCT CGCCGCGCTA CCTGCTGGTG CTGGCTGGGG GCAAATACTG GGGGTGGCGA TACTCTGCGG CATTGGCTTC ACCATGAGCC TGTTCGTTGG CTCGCTCGCC TTCTCCCCAG GCAGTAGCGA ATACGCCGGT ATGGACCGCA TGGGGATTCT TACCGGCTCG TTCTTCGCCG CAGTGATCGG CTACGCCGTC ACCGCCATGG CCAGCCGCAA GCCCCGTGTT GGTTGA
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Protein sequence | MRSLFTRFFQ LEAASGLLLI AAAVLALIIN NSPLSYLYSG LLDVPVAVQI GALNIAKPLL LWINDGLMAL FFLLIGLEVK REVVDGHLSK PSQVILPATA AVGGMVVPAL IYWFINRDNP AAVAGWAIPT ATDIAFALGV LALLGKRVPV SLKLFLMTLA IIDDLGAIIV IALFYSGTLS SVSLLLAAAC LVVLIAMNRL GVVKLGPYMV IGLILWVCVL KSGVHATLAG VALALCIPLR TRNAETSPLL ALEHALHPWV AYAILPLFAF ANAGVSLAGM TVESFTHPVP MGIAVGLLLG KTVGVFGLTW LAVKLRLAAL PAGAGWGQIL GVAILCGIGF TMSLFVGSLA FSPGSSEYAG MDRMGILTGS FFAAVIGYAV TAMASRKPRV G
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