Gene PputGB1_4267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4267 
Symbol 
ID5872074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4777067 
End bp4779055 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content65% 
IMG OID641549401 
Productfusaric acid resistance protein region 
Protein accessionYP_001670491 
Protein GI167035260 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATCA CCCTTCAGGC CCTGTTCGCC CCCAGCAGCC TCGCCCTCAA GTTCGCCGTC 
AAGACTTTGC TCGGTGGTGG CCTGGCGTTG TGGCTGGCGA TGCGTTGGGG CCTGGAGCAA
CCCGCTTGGG CGCTGATGAC GGCTTTCATC GTCGCCCAGC CGCTATCGGG CATGGTGGTT
CAGAAAGGCC TGGCGCGGTT TGCGGGTACC TTGGTCGGCA CCGTCATGTC GGTAGTGTTA
ATTGGCCTGT TCGCGCAGAC ACCTGGCCTG TTTCTGCTTA GCCTGGCCTT GTGGCTGGCG
CTTTGTACCG CCGCGTCCAC CCAGTTGCGC AGCGCCTGGG CCTACGCCTT CGTGTTGGCC
GGCTACACCG CGGCGATCAT TGCCTTGCCG GCCATCGACC ACCCGCTGCA GGTGTTCGAC
CAGGCCGTGG CCCGTTGCAC CGAGATTTGC CTGGGCATTT TCTGCGCTAC AGCCAGCAGT
GCCTTGCTCT GGCCCATGCG GGTCGAGCAG CAACTGGGCG GGCAAGCACG GCAGGCTTTG
CAGAACGGCC TGCAGGCCGC CAGCGCCATG CTGGGTGGTG AGGACGAGGC GCGTAAAGGC
CTGCTGGACA GCCTGGGGCG CATCGTTGCC ATCGACAGTC AACGTGAGCA TGCCTGGTTC
GAGGGCAACC GCGGGCGCCA GCGTGCCCGT GCCATTCGCG GCCTTAGCCA GAAGCTGATG
GTGCTGTTGC GCATCTCCCG TTCGGTGCGC CGCCAGTGGC GGCAACTGGA TGAGCGGGAG
GCCGGGCGTC TGGCGCCCTG GTTGGAGGAG GTGCGCACGC TGCTGGGCAA ACCCGATCAG
CCCAGCCTGT TGCTGTTACG CCAGCGCATT TGGGATGCCG CTCACAATGA GCAGATCAGC
CCGTCGGAAC ACTTCTGCCT GGCGCGCATG GCCCTGCTGC TGGATTACGC CATGGCTGCC
AGCCAGGCGC TGGAGGATGT GGAGGCTGGC AGGGCACCCA AGGATGTGTC CCAGGGTCTG
GCTGCACACC GTGATTGGTC GCTGGCCTTG CTGTTCGGTT CGCGTAGCGC GCTGGCCTTT
CTGGTCATGA GCGGCTTCTG GCTGGCCACG GCCTGGCCTT CGGCGCCGGG TGGCCTGGTG
CTGACCTGTG TGGTCTGCAG CCTGTTCGCC AGCCGCGAGA ATGGTGCGCA AATTGGCCTG
AGCTTTCTGC GGGGGATCTT TTTGGCGATA CCTGCGGCGT TTTTGGTCGG GCAGATCTTG
CTCCCGCAAT GGAGCAGCTT CGCCATGCTC TGCCTGGGTA TGGGTGTGCC GCTGTTTCTG
GGCGCATTGG GTATGGCCCA CCCACGTACC GGGGCCACCG CCACCTCTTA CTGCCTGCAC
TTCATTGTGC TGGTGTCGCC GCTTAACGCC ATGCAGTTCG GCGTGGCGAC CCTGCTGAAC
AGTGCCCTGG CGATGCTGGT GGGGGTATCG GCGGCGGTCA TGGCCTTTCG TTTATTGGTG
TTTCGCCACC CGGCCTGGCT GGGGCGGCGC TTGCGCGCGG CAACCCAAAG CGACTTGGTG
CGCCTTACCC GGCGCGATTT GCGCGGGGCC GACAGCTGGT TTGGCGGGCG CATGGCCGAC
CGCCTGATGC AACTGGCGCG GCATGCCAGC GAATTACCGG AAGACCAGCG CAAACGCTGG
GATGATGGCC TGCACGGGCT GGATATCGGC GACGAACTGG TGCACCTGCG CATGTGTCTG
GCTGTCGCCC AGGCCCCCTT GGGGCTAGCC GAGCGTGAGT ACCTGCAACA AGTGGAGGCA
GTGCTGGCCA AAGGGCCGGC TGCCGGGCGT GGTCAGCGCC TGGATACTGC CAGTGAACAG
TTCCTTGCTG CGTTGCGCCG CCTGCCTGCC AGCGACCCGC TACGGCTGGC CGAGGGGGCG
GTGCTGCAGT TGCAGAAAAG CTGGGGCAAG TGGTGTCGCT GGCAGGAGGA AACCCATGGG
GTTGCGTGA
 
Protein sequence
MPITLQALFA PSSLALKFAV KTLLGGGLAL WLAMRWGLEQ PAWALMTAFI VAQPLSGMVV 
QKGLARFAGT LVGTVMSVVL IGLFAQTPGL FLLSLALWLA LCTAASTQLR SAWAYAFVLA
GYTAAIIALP AIDHPLQVFD QAVARCTEIC LGIFCATASS ALLWPMRVEQ QLGGQARQAL
QNGLQAASAM LGGEDEARKG LLDSLGRIVA IDSQREHAWF EGNRGRQRAR AIRGLSQKLM
VLLRISRSVR RQWRQLDERE AGRLAPWLEE VRTLLGKPDQ PSLLLLRQRI WDAAHNEQIS
PSEHFCLARM ALLLDYAMAA SQALEDVEAG RAPKDVSQGL AAHRDWSLAL LFGSRSALAF
LVMSGFWLAT AWPSAPGGLV LTCVVCSLFA SRENGAQIGL SFLRGIFLAI PAAFLVGQIL
LPQWSSFAML CLGMGVPLFL GALGMAHPRT GATATSYCLH FIVLVSPLNA MQFGVATLLN
SALAMLVGVS AAVMAFRLLV FRHPAWLGRR LRAATQSDLV RLTRRDLRGA DSWFGGRMAD
RLMQLARHAS ELPEDQRKRW DDGLHGLDIG DELVHLRMCL AVAQAPLGLA EREYLQQVEA
VLAKGPAAGR GQRLDTASEQ FLAALRRLPA SDPLRLAEGA VLQLQKSWGK WCRWQEETHG
VA