Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4267 |
Symbol | |
ID | 5872074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4777067 |
End bp | 4779055 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549401 |
Product | fusaric acid resistance protein region |
Protein accession | YP_001670491 |
Protein GI | 167035260 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCCCATCA CCCTTCAGGC CCTGTTCGCC CCCAGCAGCC TCGCCCTCAA GTTCGCCGTC AAGACTTTGC TCGGTGGTGG CCTGGCGTTG TGGCTGGCGA TGCGTTGGGG CCTGGAGCAA CCCGCTTGGG CGCTGATGAC GGCTTTCATC GTCGCCCAGC CGCTATCGGG CATGGTGGTT CAGAAAGGCC TGGCGCGGTT TGCGGGTACC TTGGTCGGCA CCGTCATGTC GGTAGTGTTA ATTGGCCTGT TCGCGCAGAC ACCTGGCCTG TTTCTGCTTA GCCTGGCCTT GTGGCTGGCG CTTTGTACCG CCGCGTCCAC CCAGTTGCGC AGCGCCTGGG CCTACGCCTT CGTGTTGGCC GGCTACACCG CGGCGATCAT TGCCTTGCCG GCCATCGACC ACCCGCTGCA GGTGTTCGAC CAGGCCGTGG CCCGTTGCAC CGAGATTTGC CTGGGCATTT TCTGCGCTAC AGCCAGCAGT GCCTTGCTCT GGCCCATGCG GGTCGAGCAG CAACTGGGCG GGCAAGCACG GCAGGCTTTG CAGAACGGCC TGCAGGCCGC CAGCGCCATG CTGGGTGGTG AGGACGAGGC GCGTAAAGGC CTGCTGGACA GCCTGGGGCG CATCGTTGCC ATCGACAGTC AACGTGAGCA TGCCTGGTTC GAGGGCAACC GCGGGCGCCA GCGTGCCCGT GCCATTCGCG GCCTTAGCCA GAAGCTGATG GTGCTGTTGC GCATCTCCCG TTCGGTGCGC CGCCAGTGGC GGCAACTGGA TGAGCGGGAG GCCGGGCGTC TGGCGCCCTG GTTGGAGGAG GTGCGCACGC TGCTGGGCAA ACCCGATCAG CCCAGCCTGT TGCTGTTACG CCAGCGCATT TGGGATGCCG CTCACAATGA GCAGATCAGC CCGTCGGAAC ACTTCTGCCT GGCGCGCATG GCCCTGCTGC TGGATTACGC CATGGCTGCC AGCCAGGCGC TGGAGGATGT GGAGGCTGGC AGGGCACCCA AGGATGTGTC CCAGGGTCTG GCTGCACACC GTGATTGGTC GCTGGCCTTG CTGTTCGGTT CGCGTAGCGC GCTGGCCTTT CTGGTCATGA GCGGCTTCTG GCTGGCCACG GCCTGGCCTT CGGCGCCGGG TGGCCTGGTG CTGACCTGTG TGGTCTGCAG CCTGTTCGCC AGCCGCGAGA ATGGTGCGCA AATTGGCCTG AGCTTTCTGC GGGGGATCTT TTTGGCGATA CCTGCGGCGT TTTTGGTCGG GCAGATCTTG CTCCCGCAAT GGAGCAGCTT CGCCATGCTC TGCCTGGGTA TGGGTGTGCC GCTGTTTCTG GGCGCATTGG GTATGGCCCA CCCACGTACC GGGGCCACCG CCACCTCTTA CTGCCTGCAC TTCATTGTGC TGGTGTCGCC GCTTAACGCC ATGCAGTTCG GCGTGGCGAC CCTGCTGAAC AGTGCCCTGG CGATGCTGGT GGGGGTATCG GCGGCGGTCA TGGCCTTTCG TTTATTGGTG TTTCGCCACC CGGCCTGGCT GGGGCGGCGC TTGCGCGCGG CAACCCAAAG CGACTTGGTG CGCCTTACCC GGCGCGATTT GCGCGGGGCC GACAGCTGGT TTGGCGGGCG CATGGCCGAC CGCCTGATGC AACTGGCGCG GCATGCCAGC GAATTACCGG AAGACCAGCG CAAACGCTGG GATGATGGCC TGCACGGGCT GGATATCGGC GACGAACTGG TGCACCTGCG CATGTGTCTG GCTGTCGCCC AGGCCCCCTT GGGGCTAGCC GAGCGTGAGT ACCTGCAACA AGTGGAGGCA GTGCTGGCCA AAGGGCCGGC TGCCGGGCGT GGTCAGCGCC TGGATACTGC CAGTGAACAG TTCCTTGCTG CGTTGCGCCG CCTGCCTGCC AGCGACCCGC TACGGCTGGC CGAGGGGGCG GTGCTGCAGT TGCAGAAAAG CTGGGGCAAG TGGTGTCGCT GGCAGGAGGA AACCCATGGG GTTGCGTGA
|
Protein sequence | MPITLQALFA PSSLALKFAV KTLLGGGLAL WLAMRWGLEQ PAWALMTAFI VAQPLSGMVV QKGLARFAGT LVGTVMSVVL IGLFAQTPGL FLLSLALWLA LCTAASTQLR SAWAYAFVLA GYTAAIIALP AIDHPLQVFD QAVARCTEIC LGIFCATASS ALLWPMRVEQ QLGGQARQAL QNGLQAASAM LGGEDEARKG LLDSLGRIVA IDSQREHAWF EGNRGRQRAR AIRGLSQKLM VLLRISRSVR RQWRQLDERE AGRLAPWLEE VRTLLGKPDQ PSLLLLRQRI WDAAHNEQIS PSEHFCLARM ALLLDYAMAA SQALEDVEAG RAPKDVSQGL AAHRDWSLAL LFGSRSALAF LVMSGFWLAT AWPSAPGGLV LTCVVCSLFA SRENGAQIGL SFLRGIFLAI PAAFLVGQIL LPQWSSFAML CLGMGVPLFL GALGMAHPRT GATATSYCLH FIVLVSPLNA MQFGVATLLN SALAMLVGVS AAVMAFRLLV FRHPAWLGRR LRAATQSDLV RLTRRDLRGA DSWFGGRMAD RLMQLARHAS ELPEDQRKRW DDGLHGLDIG DELVHLRMCL AVAQAPLGLA EREYLQQVEA VLAKGPAAGR GQRLDTASEQ FLAALRRLPA SDPLRLAEGA VLQLQKSWGK WCRWQEETHG VA
|
| |