| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4039 |
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| Symbol | |
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| ID | 5871839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4489072 |
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| End bp | 4490433 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549167 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001670265 |
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| Protein GI | 167035034 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.541201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA ATTTCCCGCA CTTGCCTGAG GTTACCTCCG TGTTCTCCCA ATTCGCCCTG
CATGAACGCC TGCTTAAAGC CGTGGCCGAG CTTAAATTTG TCGAGCCAAC CCCGGTGCAG
GCTGCGGCCA TCCCCCTGGC CCTGCAAGGG CGTGACCTGC GCGTGACCGC GCAGACTGGT
AGCGGCAAAA CGGCAGCTTT CGTGCTGCCG CTGCTCAACC GCCTGGTCGA CCTGAAAGGT
GGACGGGTAG AAATCCGCTC GCTGATCCTG CTGCCAACTC GCGAGCTGGC CCAGCAGACC
CTCAAGCAAG TGCAGCTGTT CTCGCAGTTC ACTTACGTCA AGGCAGGCCT GGTCACCGGC
GGTGAAGACT TCAAGGAACA GGCCGCCATG CTGCGCAAAG TGCCGGACGT GCTGATCGGC
ACCCCGGGCC GCCTGCTTGA GCAACTGAAT GCCGGCAACC TCGACCTGTC CCATGTGAAG
GTGCTGATCC TCGACGAAGC CGACCGCATG CTCGACATGG GCTTCGCCGA AGACATGGAG
CGCCTGTGCA AGGAATGCGA GAACCGCGAG CAGACCCTGC TGTTCTCCGC CACTACCGGT
GGCGCGGCCC TGCGCGACAT CATCGGCAAA GTGCTGAAAG ACCCTGAGCA CCTGATGCTC
AACAGTGTTT CGCAACTGGC CGAAGGCACC CGCCAGCAGA TCATCACCGC CGACCACGAC
CAGCACAAGG AGCAGATCGC GCAGTGGCTG CTGGCCAACG AAACCTTCGA CAAGGCGATT
ATCTTCACCA ACACCCGCGC CATGGCCGAC CGCATCTACG GTCACCTGGT GGCCAAGGAC
GTGAAAGCCT TCGTGCTGCA TGGCGAGAAA GACCAGAAGG ACCGCAAGCT GGCCATCGAG
CGCTTCAAGC AGGGTAGCTC CAAGGTACTG GTCGCCACCG ACGTGGCAGC CCGTGGCCTG
GATATCGACG GCCTGGACCT GGTGATCAAC TTCGACATGC CACGCAGCGG CGACGAGTAC
GTACACCGTG TGGGCCGCAC CGGCCGTGCC GGTGGTGAAG GCCTGGCGAT CTCGCTGATC
ACCCACAACG ACTGGAACCT GATGTCGAGC ATCGAGCGCT ACCTCAAGCA GCAGTTCGAG
CGCCGGGTGA TCAAGGAAGT GAAGGGCACT TACAGCGGGC CGAAGAAGGT CAAGGCTTCG
GGCAAGGCTG TTGGGGCCAA GAAGAAGAAA GTTGACAAGA AGACCGGTGA CAAGAAGGCT
GCCGCCAAGC GCAAGCCAAC CGCCAAGCCG AGGGCCAACG CACCGCTGGC CAGCGCTGAC
GGCCTGGCGC CGCTGAAGAA GCGCAAGCCT GCTGCCGAGT AA
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| Protein sequence | MQLNFPHLPE VTSVFSQFAL HERLLKAVAE LKFVEPTPVQ AAAIPLALQG RDLRVTAQTG
SGKTAAFVLP LLNRLVDLKG GRVEIRSLIL LPTRELAQQT LKQVQLFSQF TYVKAGLVTG
GEDFKEQAAM LRKVPDVLIG TPGRLLEQLN AGNLDLSHVK VLILDEADRM LDMGFAEDME
RLCKECENRE QTLLFSATTG GAALRDIIGK VLKDPEHLML NSVSQLAEGT RQQIITADHD
QHKEQIAQWL LANETFDKAI IFTNTRAMAD RIYGHLVAKD VKAFVLHGEK DQKDRKLAIE
RFKQGSSKVL VATDVAARGL DIDGLDLVIN FDMPRSGDEY VHRVGRTGRA GGEGLAISLI
THNDWNLMSS IERYLKQQFE RRVIKEVKGT YSGPKKVKAS GKAVGAKKKK VDKKTGDKKA
AAKRKPTAKP RANAPLASAD GLAPLKKRKP AAE
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