Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3904 |
Symbol | |
ID | 5871698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4348849 |
End bp | 4349706 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549026 |
Product | flagellar motor protein MotD |
Protein accession | YP_001670130 |
Protein GI | 167034899 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCGCC GTCGTCATAC CGAGGAACAC GAAAACCACG AGCGCTGGTT GGTGTCTTAC GCCGACTTCA TTACTTTGCT ATTCGCCTTT TTCGTGGTGA TGTACTCGAT TTCCTCGATC AACGAGGGCA AGTACAAGGT TATTTCCCAG GCCTTGCTTG GTGTCTTCAA TGACCCCGAG CGCAGCATGA AGCCGATCCC CATTGGCGAT GAACAGCCAT TGAGCGTGCG CCCGGCAGAG CCACTGGTGA AAGACAGCGA GCAGACCGAG GCGGGCCTGG CCGCGACCAA TGTCGACCCG TTGAAAACCA TCAGCGATGA TGTGCGCGAC GCTTTTGGCG ACCTGATCAA CAGTAACCAG ATGACCGTGC GTGGCAACGA GCTGTGGATC GAGATCGAGT TGAATTCGTC GCTGTTGTTC GGCAGTGGCG ATGCCATGCC CAGTGACAAG GCGTTTGCGA TCATCGACAA GGTGGCCAAC ATTCTCAAGC CGTTCGCCAA CCCGGTGCAC GTCGAAGGCT TCACCGACAA CCTGCCGATC CGCACCGCGC AGTACCCGAC CAACTGGGAG CTGTCGTCGG CGCGGGCGGC AAGCATCGTG CGTCTGCTGG CCATGGAAGG GGTCAACCCG GCGCGCATGG CCTCGGTTGG CTATGGCGAG TACCAGCCGG TGGCCAGCAA CGACACCGCT GACGGCCGCG CACGCAACCG TCGGGTGGTG CTGGTGATTT CCCGCAACCT CGAAGTGCGC CGCAGCCTGA CTGGTTCGGG CAGTGCCAAT GCCACGCCGG ATGCCGCATT GCGCCGGGCT GGCACACAAA GTGCACCGGC AACGCCAGCA ACGGTGGCGG GGCAGTAA
|
Protein sequence | MRRRRHTEEH ENHERWLVSY ADFITLLFAF FVVMYSISSI NEGKYKVISQ ALLGVFNDPE RSMKPIPIGD EQPLSVRPAE PLVKDSEQTE AGLAATNVDP LKTISDDVRD AFGDLINSNQ MTVRGNELWI EIELNSSLLF GSGDAMPSDK AFAIIDKVAN ILKPFANPVH VEGFTDNLPI RTAQYPTNWE LSSARAASIV RLLAMEGVNP ARMASVGYGE YQPVASNDTA DGRARNRRVV LVISRNLEVR RSLTGSGSAN ATPDAALRRA GTQSAPATPA TVAGQ
|
| |