Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3837 |
Symbol | |
ID | 5871630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4275561 |
End bp | 4275980 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641548959 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001670063 |
Protein GI | 167034832 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.265561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.533813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTG CCGACGTTGC CAAACGCACA GGCGTACCTG CATCGACACT GCGTTACTAC GAGAAGAAAG GTTTGCTCAA GTCCCTGGCC GGGCGCAGCC AGCGGCGGCA GTTTGCTGCC GACGTGGCAG ACAGGCTGGC ACTGATCGCC CTAGGGCAAG CGGCGGGATT TTCGCTGGAT GAAGTAGGCG TCATGCTGGT GGACTTGCAG GTCGACCGGC AGATGCTGCT GGCCAAGGCA GACGAAATTG ATGCGCGGAT CAGGCGGCTG CAGGCCATGA GCAAAGGATT GCGGCATGCC GCGCAGTGCC CGGAGGAAGA TCATCTGGCA TGCCCGAAAT TTCAGCGGCT GATGAAACTG TCGGCTACGG GAGCATTGGG AATGAAGCAG GGAAGAACGA AGGCGTTCGC GGCAAATTGA
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Protein sequence | MDIADVAKRT GVPASTLRYY EKKGLLKSLA GRSQRRQFAA DVADRLALIA LGQAAGFSLD EVGVMLVDLQ VDRQMLLAKA DEIDARIRRL QAMSKGLRHA AQCPEEDHLA CPKFQRLMKL SATGALGMKQ GRTKAFAAN
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