Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3828 |
Symbol | |
ID | 5871621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4266970 |
End bp | 4267653 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641548950 |
Product | hypothetical protein |
Protein accession | YP_001670054 |
Protein GI | 167034823 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGACC TGCTTCCCCT GCTGGGCTCG GCGCTGGTCC TTGGCCTGCT GGGCGGCGGC CACTGCCTGG GTATGTGCGG CGGCCTGATG GGGGCGCTGA CCCTGGCCAT ACCGCCCGAA CAACGAGGCA AGCGCCTGCG CCTGCTGCTG GCCTACAACC TCGGGCGTGT GCTCAGTTAT ACCAGCGCCG GCCTGTTGCT GGGCCTGGCC GGATGGGCCG TGGCCAGCAG CCCGGCAGCT CTGGGGCTGC GGGTGGTGGC AGCGCTGTTG TTGATTGCCA TGGGCCTGTA CCTGGCCGGC TGGTGGAGCG GCCTGACCCG CATCGAAGCC CTGGGGCGCG GGCTGTGGCG GCACATCCAG CCGGTGGCGT CACGCTTGTT GCCGGTTTCC AGCGTGCCCC GGGCGTTGCT GCTGGGCGCC CTGTGGGGCT GGCTGCCGTG CGGGTTGGTG TACAGCACAC TGCTATGGGC GGCCAGCCAG GGTAATGCCA GCTATAGCGC GGCGTTGATG CTGGCGTTCG GGGTGGGCAC CTGGCCGGTG TTGCTGGCAA CGGGGCTGGC GGCGGAACGG GTAAACGCGT TGTTGAGGCG GCGCAGCGTG CGGGTGGCTG GCGGGCTGCT GGTGATGCTA TTTGGCATCT GGACCCTGCC CGGGCCGCAC CAACACTGGC TGATGGGGCA TTGA
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Protein sequence | MPDLLPLLGS ALVLGLLGGG HCLGMCGGLM GALTLAIPPE QRGKRLRLLL AYNLGRVLSY TSAGLLLGLA GWAVASSPAA LGLRVVAALL LIAMGLYLAG WWSGLTRIEA LGRGLWRHIQ PVASRLLPVS SVPRALLLGA LWGWLPCGLV YSTLLWAASQ GNASYSAALM LAFGVGTWPV LLATGLAAER VNALLRRRSV RVAGGLLVML FGIWTLPGPH QHWLMGH
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