| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3780 |
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| Symbol | |
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| ID | 5871573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4204358 |
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| End bp | 4204834 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548902 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_001670006 |
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| Protein GI | 167034775 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACATT ACTATCGCGA ACTGGTGGGT TTCCTCTCCG CGCGCCTGGG CAGTCGCCAG
GCCGCCGAGG ACGTGGCACA CGATGCTTAC CTGCGGGTGC TGGAGCGCAC TGACGCCGAG
CGCATCGAGC ACCCACGCGC CTTTCTCTAC CGCACCGCGC TCAACCTGGT GGTCGACCGC
CACCGGCGCC ACCTGGTGCG CCAGGCCGAG CCGCTGGAGG TGCTGGACAG CGACGAACGT
TGGCACAGCC CGGCGCCGGC CCACGACATG CAGCTGGACC AGCGCCTGGC GCTGATGCAG
CGCGCGCTGG ATGAACTGAG CAAGATCTGC CGCGACTGCT TTCTGCTGCG CAAGCTCGAA
GGCCTGTCGC ACCAGCAGAT TGCCGAGCAC CTGGGCATAT CCCGTAGCCT GGTGGAAAAG
CACATCGTCA ATGCCATGAA GCACTGCCGG CTGCGCATGC GAGAGTGGGA ATCGTGA
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| Protein sequence | MEHYYRELVG FLSARLGSRQ AAEDVAHDAY LRVLERTDAE RIEHPRAFLY RTALNLVVDR
HRRHLVRQAE PLEVLDSDER WHSPAPAHDM QLDQRLALMQ RALDELSKIC RDCFLLRKLE
GLSHQQIAEH LGISRSLVEK HIVNAMKHCR LRMREWES
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