Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3668 |
Symbol | |
ID | 5871460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 4082541 |
End bp | 4083056 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548790 |
Product | sigma-70 region 4 type 2 |
Protein accession | YP_001669895 |
Protein GI | 167034664 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000155217 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000000000111348 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCCGTC TGCTGCTGCC CCTTGAACAC CCTACCACTG CCGCCGAACA CAATGCCGAC GATGCCCTTC TACATGCCCT GAAACGGCTG CCACGGCGCG TGCAGCAGGT GTTTCTGCTC AACCGCCTGG ACCAGCTGGA CTTTGCCACG ATCGCTAGCC GCCTTGATCT GCCACTGGCA AGCATTGAAC GGAACATGGA CCAAGCGCTG CAGGTGGGCC GCTCGCGCCG GGATGTACTG GCGAGTGTTG CCGGGCAATG GTATGTGCGC TTGCAGAGCC CACAGGTGAC AGCGTGCGAG CGGATCGACT TCCGCCGCTG GCTGGATGCG GACCCGGCTA ACTTGCAAGC GTTTCATGAC ACAGAGCTAC GCTGGCGCAG CCTGCTGGCA CCAGCACGAC AACTGGGCCA CGACGGCTGG TATCGGCAAG GCCGGGCTGC ACTGTCGCTG GGTGGTTGCT CGATTGCGGT GGGGCTTGGC GTTACAGCCC TGGTACTGTT CGGCTTCTGG GCCTGA
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Protein sequence | MTRLLLPLEH PTTAAEHNAD DALLHALKRL PRRVQQVFLL NRLDQLDFAT IASRLDLPLA SIERNMDQAL QVGRSRRDVL ASVAGQWYVR LQSPQVTACE RIDFRRWLDA DPANLQAFHD TELRWRSLLA PARQLGHDGW YRQGRAALSL GGCSIAVGLG VTALVLFGFW A
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