Gene PputGB1_3577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3577 
Symbol 
ID5871368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3976108 
End bp3976860 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID641548698 
ProductAsp/Glu/hydantoin racemase 
Protein accessionYP_001669804 
Protein GI167034573 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.373833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC TATACCGCAT CGGCCAGATC GTGCCGAGCT CCAACACCAC CATGGAAACC 
GAAATCCCGG CGATGCTCCA CGCGCGCCAG GCGATCCGCC CCGAACGCTT CACCTTCCAT
TCCAGCCGCA TGCGCATGAA GCAGGTGAAG AAGGAGGAGC TGGCCGCCAT GGACGCCGAG
TCCGACCGCT GCGCCGTCGA GCTGTCCGAC GCCAAGGTCG ATGTGCTGGG CTACGCCTGC
CTGGTGGCGA TCATGGCCAT GGGCCTGGGC TATCACCGCC AATCGGAAAA GCGCCTGCAG
CAGGCCACTG CCGATAACGA CGCACTGGCA CCGGTCATCA CCAGTGCCGG GGCGTTGGTC
GAAGCCTTGC ATGTCATGAA GGCCAAGCGC ATCGCCATCG TCGCACCGTA CATGAAGCCG
CTGACCGAGC TGGTGGTGAA CTACATCCGC GAGGAAGGCT TCGAGGTGCA GGACTGGCGC
GCGCTGGAAA TCCCCGACAA CCTCGCCGTG GCCCGCCACG ACCCGGCCAA CCTGCCGGGC
ATCGTCGCCG GCATGGACCT TGAGGGCGTC GATGTGGTGG TGTTGTCGGC CTGCGTGCAG
ATGCAATCGC TGCCGGCGGT GGCCAAGGTC GAGGCGCAAA CCGGCAAGCC GGTGGTCACT
GCCGCCATCG CCACCACTTA CGCCATGCTC AAGGCGCTCG ACCTGGAACC GGTCGTGCCG
GGTGCCGGTG CCCTGCTGTC GGGTGCCTAC TGA
 
Protein sequence
MTKLYRIGQI VPSSNTTMET EIPAMLHARQ AIRPERFTFH SSRMRMKQVK KEELAAMDAE 
SDRCAVELSD AKVDVLGYAC LVAIMAMGLG YHRQSEKRLQ QATADNDALA PVITSAGALV
EALHVMKAKR IAIVAPYMKP LTELVVNYIR EEGFEVQDWR ALEIPDNLAV ARHDPANLPG
IVAGMDLEGV DVVVLSACVQ MQSLPAVAKV EAQTGKPVVT AAIATTYAML KALDLEPVVP
GAGALLSGAY