Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3577 |
Symbol | |
ID | 5871368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3976108 |
End bp | 3976860 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548698 |
Product | Asp/Glu/hydantoin racemase |
Protein accession | YP_001669804 |
Protein GI | 167034573 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3473] Maleate cis-trans isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.373833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGC TATACCGCAT CGGCCAGATC GTGCCGAGCT CCAACACCAC CATGGAAACC GAAATCCCGG CGATGCTCCA CGCGCGCCAG GCGATCCGCC CCGAACGCTT CACCTTCCAT TCCAGCCGCA TGCGCATGAA GCAGGTGAAG AAGGAGGAGC TGGCCGCCAT GGACGCCGAG TCCGACCGCT GCGCCGTCGA GCTGTCCGAC GCCAAGGTCG ATGTGCTGGG CTACGCCTGC CTGGTGGCGA TCATGGCCAT GGGCCTGGGC TATCACCGCC AATCGGAAAA GCGCCTGCAG CAGGCCACTG CCGATAACGA CGCACTGGCA CCGGTCATCA CCAGTGCCGG GGCGTTGGTC GAAGCCTTGC ATGTCATGAA GGCCAAGCGC ATCGCCATCG TCGCACCGTA CATGAAGCCG CTGACCGAGC TGGTGGTGAA CTACATCCGC GAGGAAGGCT TCGAGGTGCA GGACTGGCGC GCGCTGGAAA TCCCCGACAA CCTCGCCGTG GCCCGCCACG ACCCGGCCAA CCTGCCGGGC ATCGTCGCCG GCATGGACCT TGAGGGCGTC GATGTGGTGG TGTTGTCGGC CTGCGTGCAG ATGCAATCGC TGCCGGCGGT GGCCAAGGTC GAGGCGCAAA CCGGCAAGCC GGTGGTCACT GCCGCCATCG CCACCACTTA CGCCATGCTC AAGGCGCTCG ACCTGGAACC GGTCGTGCCG GGTGCCGGTG CCCTGCTGTC GGGTGCCTAC TGA
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Protein sequence | MTKLYRIGQI VPSSNTTMET EIPAMLHARQ AIRPERFTFH SSRMRMKQVK KEELAAMDAE SDRCAVELSD AKVDVLGYAC LVAIMAMGLG YHRQSEKRLQ QATADNDALA PVITSAGALV EALHVMKAKR IAIVAPYMKP LTELVVNYIR EEGFEVQDWR ALEIPDNLAV ARHDPANLPG IVAGMDLEGV DVVVLSACVQ MQSLPAVAKV EAQTGKPVVT AAIATTYAML KALDLEPVVP GAGALLSGAY
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