Gene PputGB1_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3548 
Symbol 
ID5871337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3949530 
End bp3949883 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content58% 
IMG OID641548667 
Productresponse regulator receiver protein 
Protein accessionYP_001669775 
Protein GI167034544 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0400953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA TCCTGATCGT CGATGACGAG TACCTGATCG CCGATATCCT CGGCTTTGCC 
CTGGAGGACG AAGGTTACCT GGTGGAAAAG GCCAGTAATG GCTGCAAGGC GCTGGAGGCG
CTGAAGGAAA AGCGCGTGCA ACTGGTCATC ACCGATTACA TGATGCCGCT GCTCAATGGT
GAGGAGCTGG TGCGTGCGAT GCGCGAGGAC CCGGCGTTAA GCGAGTTGCC GGTCATTCTC
ATGAGCGGCG CGCAGGCCAG CCAAGGATGC CCGGCCCTGT TCGCCGCCAT ATTCGACAAA
CCATTCGACA TGGATGAGAT GATCGCCAAA GTGCGTCAGT TGCTGGGCAC CTGA
 
Protein sequence
MNTILIVDDE YLIADILGFA LEDEGYLVEK ASNGCKALEA LKEKRVQLVI TDYMMPLLNG 
EELVRAMRED PALSELPVIL MSGAQASQGC PALFAAIFDK PFDMDEMIAK VRQLLGT