| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3546 |
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| Symbol | |
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| ID | 5871335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3948011 |
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| End bp | 3949033 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548665 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001669773 |
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| Protein GI | 167034542 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0497199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACT GCCCCCTGCC ACGCACCCTG CACTACGTTG ACGACAGCCA GCCAGGCATG
ACCCGGCGAC GCTGGCGCGA CCGTTTCATC TACCTGGATG CCGACGGCCA GCGGGTGCGC
GACAGCGACA CCTTGGCGCG CATCGCCGCG CTGGTGATTC CCCCGGCCTA CACCGATGTA
TGGATCTGCG CCGACCCGCA GGGCCACCTG CAGGCCACCG GTCGCGATGC CCGTGGCCGC
AAGCAGTACC GCTATCACGC GCAGTGGCGC GAACTGCGTG ACCAACACAA GTATGGGCGC
ATGCTGGCCT TTGCCCAGGC ACTACCAAAG CTGCGCGCGC AACTGGAAGC CCACCTGGCG
CGGCCAGGGC TGGACCGGGA AAAGGTCATG GCATTGGTGG TGAGCCTGCT GGACCACACC
CTGATCCGCA TTGGTAACCA GCGTTACCTG CGCGACAACC AGTCTTATGG CCTGACGACC
CTGCGTAACC GCCATGTGCA GGTCAAAGGC AGCACCATTC GCTTTCAATT TCGCGGCAAG
CGTGGCGTCG AACACAACGT CACCCTCAAC GACCGACGCC TGGCCAGCCT GCTCAAACGC
TGCATGGAGC TGCCTGGCCA GACACTGTTT CAATACCTGG ACGAAGACGG CCAGCGCCAC
AGCGTAGGCT CCAGCGAGGT CAACCAGTTC CTGCAGCAGT TGACCGGCGC AGACTTCACC
GCCAAGGACT ACCGCACCTG GGCCGGCAGC AGCCTGGCGT TGGACCTGCT CAAACCCCTG
GCCTGGGAAC CGGAGAGTGA AGCCAAACGC CAGGTCGCCG CGATAGTCCG CCAGGTCGCC
ACGCGCCTGG GCAATACGCC GGCAGTGTGC AGACGCTGCT ACATCCATCC GGCAGTGCTG
GAGCACTATG CCCAGGGACG TCTGGCCCAA TTGCCCAAGA GCCGCGTGCG CAAAGGCCTG
GACCCCGAGG AAGTGGCCTT GCTGCTGTTT CTTCAGGTAC TCGAGGAACA GGACGGCGAT
TAA
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| Protein sequence | MLDCPLPRTL HYVDDSQPGM TRRRWRDRFI YLDADGQRVR DSDTLARIAA LVIPPAYTDV
WICADPQGHL QATGRDARGR KQYRYHAQWR ELRDQHKYGR MLAFAQALPK LRAQLEAHLA
RPGLDREKVM ALVVSLLDHT LIRIGNQRYL RDNQSYGLTT LRNRHVQVKG STIRFQFRGK
RGVEHNVTLN DRRLASLLKR CMELPGQTLF QYLDEDGQRH SVGSSEVNQF LQQLTGADFT
AKDYRTWAGS SLALDLLKPL AWEPESEAKR QVAAIVRQVA TRLGNTPAVC RRCYIHPAVL
EHYAQGRLAQ LPKSRVRKGL DPEEVALLLF LQVLEEQDGD
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