| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3495 |
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| Symbol | |
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| ID | 5871282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3899690 |
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| End bp | 3900640 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548612 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001669722 |
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| Protein GI | 167034491 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | [TIGR02297] 4-hydroxyphenylacetate catabolism regulatory protein HpaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.816152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCATC GTCAACAGGG TCAAGCGATT TGCGAGCAAG CAGCCATGAG CGACCGGCAT
CCGATACCGA ACATCAACAT CGGCCAGGTC TATGACCAGC GCTACAGCGA CAGCGAGGTG
CATTACGACC GGCTGGGCAA CCTGGCGGGC TTTTTCGGGC GCAACATGCC AGTGCACCGA
CATGACCGGT TCTTCCAGGT GCATTACGTG AAATCGGGCA CGGTGCGGGT GTATCTGGAC
GACCAGCAGT ACATCGAGGC CGGGCCGATG TTCTTCCTCA CGCCGCCCAC GGTGGCACAC
GCGTTCGTTA CCGAAGCCGA CAGCGACGGG CATGTGCTGA CTGTGCGCCA GCAACTGGTC
TGGCAATTGA TCGAAGCCGA TGCCAGCCTG CTGCCGGCGG GCATGCAGGT GCAGCCGGCC
TGCGTGGCGC TGGGCAACCT GCCGGCCGAA TACAAGGCCG AGGCCCACCG CCTGCAAGGC
TGGCTGGAAG CGCTGAGCGA CGAGTTCGCC ACACAGCAAC CGGGGCGCGA GGCGGCGCTG
CAGTCGCTGA CCCGCTTGAT CATGGTCAGC CTGCTGCGGC TGTGCCCCAA CTCGCTGGAA
TCGACCCCGG CGCGGCATGA GGACTTGAAG ATCTTCCACC GTTTCAATGC ACTGATCGAA
GCGCATTACC TCGAGCACTG GCCGCTGGCC CGCTACGCGC AGCAGGTTGG CGTGACCGAG
GCGCGGCTGA ACGATGTGTG CCGGCGTATC GCCGACTTGC CATCCAAGCG CCTGGTACTG
GAGCGGCTGA TGCAGGAGGC CAAGCGCTTG CTGTTGTTTT CCGGTAGCAC GGCCAACGAA
ATCTGTTACC AGCTCGGCTT CAAGGACCCG GCCTATTTCA GCCGCTTCTT CAACCGCTAC
GCCAAACTCA CGCCTGGGGA GTATCGCCAG CGGCAGGCAC ACTTGCAGTG A
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| Protein sequence | MGHRQQGQAI CEQAAMSDRH PIPNINIGQV YDQRYSDSEV HYDRLGNLAG FFGRNMPVHR
HDRFFQVHYV KSGTVRVYLD DQQYIEAGPM FFLTPPTVAH AFVTEADSDG HVLTVRQQLV
WQLIEADASL LPAGMQVQPA CVALGNLPAE YKAEAHRLQG WLEALSDEFA TQQPGREAAL
QSLTRLIMVS LLRLCPNSLE STPARHEDLK IFHRFNALIE AHYLEHWPLA RYAQQVGVTE
ARLNDVCRRI ADLPSKRLVL ERLMQEAKRL LLFSGSTANE ICYQLGFKDP AYFSRFFNRY
AKLTPGEYRQ RQAHLQ
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