| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3483 |
|---|
| Symbol | |
|---|
| ID | 5871270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3889490 |
|---|
| End bp | 3889702 |
|---|
| Gene Length | 213 bp |
|---|
| Protein Length | 70 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641548600 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_001669710 |
|---|
| Protein GI | 167034479 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.207055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0338515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC GCCAAACCGG CACCGTCAAA TGGTTCAATG ATGAGAAAGG CTTCGGCTTC
ATCACCCCAC AAGGCGGCGG CGACGACCTG TTCGTTCACT TCAAGGCCAT CGAATCCGAC
GGCTTCAAGA GCCTGAAAGA AGGCCAAACT GTTTCCTTCG TCGCCGAGCG CGGTCAGAAG
GGCATGCAGG CTGCACAGGT TCGTCCGGAG TAA
|
|---|
| Protein sequence | MSNRQTGTVK WFNDEKGFGF ITPQGGGDDL FVHFKAIESD GFKSLKEGQT VSFVAERGQK
GMQAAQVRPE
|
|---|
| |