| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3461 |
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| Symbol | |
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| ID | 5871247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3872932 |
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| End bp | 3874791 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548577 |
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| Product | C-5 cytosine-specific DNA methylase |
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| Protein accession | YP_001669688 |
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| Protein GI | 167034457 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000315602 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCAT TTCAGAAAAA GAACCCGCTC GACTTCAAAA CCCAGTACGG ACTTGGCTTC
GATCCGCAAG ACGATGAGAT CGTGGTGGAC TTCTTCTGCG GTGGCGGCGG CGCCGGTACC
GGGCTGGAGA TGGGCCTGGG CAGGCCGGTC ACCGTGGCCA AGAACCACAG CCCTGCAGCC
ATAAGCATGC ACACCGCCAA CCATCCTGCA GCGCGGCACT TCACCACCGA TGTGTTTGAC
GGTGACCCGG ATGAGGAATG CCAGGGCCGT CCGGTCGGCT GGTTCCATAT GAGCCCGGAT
TGCACCCACC ACAGCCAGGC CGCCGGCGGC CAGCCGCGAA AGCGCGAGAT CCGCAACCTG
TCTTGGGTTG GGCTGAAGTG GGCCGGCAAG AAGCGGCCGC GGGTCATCAG CCTGGAGAAC
GTGAAGCAGA TCCTGCAGTG GGGCCCGCTG ATCGCCAAGC GCGACAAGGC TACCGGGCGG
GTGATGAAGC TGGACGGCAC CGTGGCTGCC ATCGGCGAAC GCGTGCCGGT GCAGCAGCAG
TTCCTGGTCC CCGACCCGAA ACGTCGCGGC ATCACCTGGC GCCGGTTCGT GCACTTGCTC
GAAGGTATGG GCTACCAGGT GGAATGGCGC GTCATCAAGG CCTGCGACTT CGGCGCACCC
ACCAGCCGCG AGCGCCTGTT CATGATCGCC CGGTGCGATG GACAGCCAAT CGTGTGGCCA
GAGCCGACCC ACGCCAAGAT CCCAGCCAAG GGCCAGCAGA AGTGGCGCAC GGCCGCCGAC
TGCATCGACT GGAGCGTGCC GAGCAAAAGC ATCTTCGGTC GCAAGAAGGA GCTGGCAGCC
GCAACGCTGC GCCGTGTGGC CAAGGGCATG AAGAAGTTCG TGCTGGACAA CCCGCAGCCC
TTCATCGTGC CGATCGCCAA CTGGTCGGGA GAGCTGGCCC AGGCTGCCTA CGAGCCGCTG
CGTACCGTTA CTTCCTGGCC GCGCGGCGGA TCCTTCGCCA TGGCAAGCCC CGTCATGATT
AACGCTGCCC ATGGCGATGG TAGGCCAGGC GGGGTGCAGC GTTGGGGTGA TGGTTGCAAA
GATGCTGGCT CTCCGCTTGG CACCGTCACA GCAAGCAACG GGCATGCCCT GGCATCGGCA
CACCTGGTCA AGTTCCGGTT CAACAGCGAA GGCTCATCCA TCACCGACCC AGTGCCAACC
ATTACCAGCG GCGGCAACTA CAAGAGGCCA GCAGGTGCGG CCCATGCCAT GGGCGTTTGC
ACAGCGTTCA TTGAGCAGGC GAACGGTGGG TTCAACACCA CGCCAGCCAA GGGCGCCGAC
GAGCCGCTGA CCACGGTCAC CAACACCGGC AGCCAGCAGC GCCTCGTGAC CGCCAGCCTG
GCCACGCTCC GACGCAACTG TGTAGGCCGT CCCGTAGATG ACCTGGTGCC GACAATGACC
GCCGGCGCCG AGCACCACGC CTTGGTCGAG TACAAACTGT CGCCGGAGCA TGAGGAAGGC
GCCCTGCGGG TAGCAGCGTT CCTGATCAGC TACTACGGCA CGGAGAACAT CAGCGCCTGC
GACGCACCGG CACCGACGGT TACCACCAAG GATCGCCTTG GCCTGGTCAC TGTCTTCGTC
AAGGGCACTC CGTACGTGAT CGTGGATATC TGCCTGCGCA TGCTCCAGCC ACACGAGCTA
TACCGCGCCC AAGGCTTCCC AGCCAGCTAC ATCATCGACA AGGGCGCCGA CGGCAAGCTG
TTCACCAAGA CCGAGCAGGT ACACATGTGC GGCAACAGCG TTAGCCCGCC ACCAATGGCA
GCGCTCGCTA GAGCCAACGA CCCGTGGCGG GTGGCGGAAC GGTCCGCCAA GGCCGCTTAA
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| Protein sequence | MSAFQKKNPL DFKTQYGLGF DPQDDEIVVD FFCGGGGAGT GLEMGLGRPV TVAKNHSPAA
ISMHTANHPA ARHFTTDVFD GDPDEECQGR PVGWFHMSPD CTHHSQAAGG QPRKREIRNL
SWVGLKWAGK KRPRVISLEN VKQILQWGPL IAKRDKATGR VMKLDGTVAA IGERVPVQQQ
FLVPDPKRRG ITWRRFVHLL EGMGYQVEWR VIKACDFGAP TSRERLFMIA RCDGQPIVWP
EPTHAKIPAK GQQKWRTAAD CIDWSVPSKS IFGRKKELAA ATLRRVAKGM KKFVLDNPQP
FIVPIANWSG ELAQAAYEPL RTVTSWPRGG SFAMASPVMI NAAHGDGRPG GVQRWGDGCK
DAGSPLGTVT ASNGHALASA HLVKFRFNSE GSSITDPVPT ITSGGNYKRP AGAAHAMGVC
TAFIEQANGG FNTTPAKGAD EPLTTVTNTG SQQRLVTASL ATLRRNCVGR PVDDLVPTMT
AGAEHHALVE YKLSPEHEEG ALRVAAFLIS YYGTENISAC DAPAPTVTTK DRLGLVTVFV
KGTPYVIVDI CLRMLQPHEL YRAQGFPASY IIDKGADGKL FTKTEQVHMC GNSVSPPPMA
ALARANDPWR VAERSAKAA
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