Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3419 |
Symbol | |
ID | 5871204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3850147 |
End bp | 3851448 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641548534 |
Product | hypothetical protein |
Protein accession | YP_001669646 |
Protein GI | 167034415 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01547] phage terminase, large subunit, PBSX family |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.80446e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCGTCTC TTAACGTGCC GCAGGCCAAC TTCCTCCGAA TGGAGAACAA GTTCCGCGGT TTCGTCGCGG GGTTTGGCAG CGGGAAAACT TGGGTAGGCT GCGCAGCATT GTGCAAGCAC GTCTGGGAAT GGCCCCGGAT CGACTCCGGC TACTTCGCCC CGACCTACCC GCAGATCCGC GACATCTTCT TCCCGACCAT CGAGGAGGTC GCCTTCGACT GGGGCCTGAA GGTCAAGACG AAGGAGAGCG ACAAGGAGGT CGAGTTCTAC AGCGGCGGCC AGTATCGCAG CACGACCATC TGCCGCTCGA TGGAGAAGCC CCAGACCATC GTGGGCTTCA AGATCGGCCA CGCCTTGGTC GATGAGCTCG ATGTTCTGCC CGCGCTGAAG GCTGAGCACG CCTGGCGCAA GATCATTGCC CGGATGCGCT ACAACGTGCC TGGGCTGAAG AACGGCGTGG ACGTGACCAC GACCCCTGAG GGGTTCAAGT TCGTCTACCA GCAGTTCGTG AAGCAGCTGC GCGAGAAGCC AGCCCTGCAG GGTATGTACG GCCTGGTGCA GGCCAGCACG TTCGACAATG AGCTGAACCT ACCGCCTGAC TACATCCCGT CGCTGATGGA GTCGTACCCG GCCCAGCTGA TCCTGGCCTA CCTGAATGGC CAGTTCGTCA ACCTCAACGC CGGGTCGATC TACCACGCTT ACGACCGCAA GCTGAATTCC TGCTTCGACA CCGTAGAGCC TGGAGAGCCC CTGTTCATCG GCATGGACTT CAACGTCGGC AAGATGGCTG CGATCACGCA CGTCAAGCGC GCAGACGGCA AGCCCAGGGC CGTAGACGAA CTGATCGATG GCTTCGATAC CCCGGACATG ATCCGGCGCA TCAAGGAGCG CTACTGGCGG CACAACGGCA GGGACTACGA GAAGACCTGT GAGATCAGGA TCTACCCGGA CGCCTCGGGC GGATCCCGCA AGTCGGTGAA TGCCAGCGAG ACGGACATCG CCATCCTGCG CCAGGCCGGC TTCGCTGTGA TCGCGCCAGA CGCCAACCCG CCAGTGAAAG ACCGCATCAA CGCCATGAAC GCGATGTTCT GCAACGCGAA TGGCGAACGC CGCTACCTGA TCAACCCGCT GCGCTGCCCG ACCTATGCAG ACGGCCTGGA GCAGCAGGTG TGGGCGCCCA ATGGTGAGCC AGACAAGAAA TCAGGCGTCG ACCACGCGAA CGACGCCGGC GGCTACTTCA TCCATCACGA CTATCCGATC AGCAGGCCGG TCACTCACGT ACCAATCTCG TTCACTTTCT GA
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Protein sequence | MPSLNVPQAN FLRMENKFRG FVAGFGSGKT WVGCAALCKH VWEWPRIDSG YFAPTYPQIR DIFFPTIEEV AFDWGLKVKT KESDKEVEFY SGGQYRSTTI CRSMEKPQTI VGFKIGHALV DELDVLPALK AEHAWRKIIA RMRYNVPGLK NGVDVTTTPE GFKFVYQQFV KQLREKPALQ GMYGLVQAST FDNELNLPPD YIPSLMESYP AQLILAYLNG QFVNLNAGSI YHAYDRKLNS CFDTVEPGEP LFIGMDFNVG KMAAITHVKR ADGKPRAVDE LIDGFDTPDM IRRIKERYWR HNGRDYEKTC EIRIYPDASG GSRKSVNASE TDIAILRQAG FAVIAPDANP PVKDRINAMN AMFCNANGER RYLINPLRCP TYADGLEQQV WAPNGEPDKK SGVDHANDAG GYFIHHDYPI SRPVTHVPIS FTF
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