| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3348 |
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| Symbol | |
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| ID | 5871133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3766359 |
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| End bp | 3768602 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548464 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001669576 |
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| Protein GI | 167034345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCAAC GTCATCCACT GGCCCGCCAG ATCAGCCTCG CGCTGCTGTT GGCCGGCACC
GGCAGCCAAG CTATCGCCGC CGACGAAAAC AATAAAAACG AACCAGCCCT GGAAACTGTC
ACCGTCACCG CCCAGCATCG CGAACAGACC TTGCAGGAAG TCCCGGTCGC CGTATCGGCC
ATCAAAGGCA CCAGCATCAC TGCCGACGGT GTGCGCTCGA TGGGCGACAT CACCACCTTC
GTGCCCAACG CCTCGGCCAA GAACCCCGAC GGCGACGGCC GCCCGCGCTG GTACATCCGT
GGCCTGGGCA CCGGCGACAC CGGTGCGGCA ACGGTCTACC CAGTGGGCAT CTACGCCGAT
GACGTGTACC TCAACGCCCC CATCGCCGGT GGCGGGCCGT TGTTCGACCT GGAACGCATC
GAGATCCTGC GTGGGCCGCA AGGCACCCTG TATGGCAAGA ACACCACTGC CGGTGCAGTG
AACGTGATCT CGAAAAAGCC GACGTTCGAC ACCGATGGCT ATGGCACGGT CGGCTTTGGC
AGCAAGAACG AGCGCATCGT CACCGGTGCC ATTGGTGGTG CGCTGGTGGA TGAAAAACTG
GCCGGGCGAG TAGCGCTGTA TTCCGAAGAA CGCGACGGTT TCCAGAACAA CGACTTCGAC
GGCAACACTT ATGGCGACGT GAACAAAAAG GCCATCCGCC TGCAGTTCCT GGCCCAGCTC
AACCCCGACC TGGACGCCCT GCTCAAGCTG CACAGCCGCC AGTTCAAAGG CGACGGCAGC
AATGGTTCGC TGCCGGTGGG CCGCTACTAC AACGTCGGTT ACGAACGCCC GCAGGGTCGC
GACATTTCGC TGAACGTCAA CGAAGACTAC CGCCTGGACC ACGACGGCGC CTCGCTGACC
TTCAACTGGT ACCTGGGCGA CTACACGCTG ACCTCGATCA GCGCCTACGA CTACATCCGC
AACCGCTCCA CCAGCGATGC CGACTACACC CCCTACGAGG TCAACGGCGC GGCCATCACC
GACAACAGCT ACCGCCAGTG GTCGCAGGAG CTGCGCCTGG CCTCGCCGGA AGACCGCCCA
CTGCACTGGT TGGTGGGCGC CCACTACTTC CATGAAGACC TGGACAGTTC TGCCCAGCGC
ATCGTCACCC CCGGCCCCAC GCCCAACGGT ACCGGCTCGA ACCAGGTGGG CACTACCGCG
TTCCGCGACC TGGGCTACGA TCACCGCACC GACAGCTACG CGCTGTTCGG CAACTTGACC
TATGACTTCA CCGATGACTT CAGCGTGACC GGCGGCCTGC GCTGGACCCA GGAGAAAAAG
GACATCGACC TGGACCTGGT GCAGTTGACC CGCGCCACGG CCAACGGCCC GCTGATTCCA
CTGGGCGGCG TAGGCACCAA CGGCAACCGT CAGGAAGACA AGACCTGGGA AGCCTGGACC
TACGACCTGA CCCCCGAGTA CCGCATCAAC GACAACCTGC GGGTGTTCTT CCGCTACGCC
CACGGCTTCC GTTCGGGTGG CTTCAACACC GGGCTGTCGA CCAGCCTGGC GCAATTGACC
ACGGTCGACC CGGAAGAACT GGATGCCTAC GAACTGGGGC TGAAGTCGGA GTGGTTCGAC
CGTCGCCTGA CCGTCAACGC CAACCTCTTC TACTACGACT ACTCCGACAT CCAGGTGAAC
CTGCTGACAG TGAACAGCGG CGTACTCACC ACCGCATTGA CCAACGGCGC CAAAGGCAAG
GTCAAGGGCG CGGAGCTGGA GGTCGAGGGC CAGCCGACCG AGCGCCTGCA CCTGCGCGCG
GCGGTGTCGT TCCTGGACAC CGAGTACACC GATTTCAAGA ACACCAACCC CACCACCGGC
GCGGTAACCG GCGACTACAG CGGCAACAGC TTCGTGCGCT CGCCACGCAA CGTGGTGTCG
CTGGGTGCCG ACTACACCAT CCCGCTGGAG GTCGGCGGCA AGCTGGTGGC CGGTGGCGAC
GTGAGTTTCC GCGACAAAGA GTATTTCCTG GCCGACCGCC AGAGCAGCGC CGACGAAACC
CTCAGCCAGC CCCACTACAC CCTGGCCAAC GCGCGGCTGA GCTGGTTCAG CCATGACGAC
AAGCTGAGCG TGACGGGCTT CGTCAACAAC CTCACCGACC GCCGCTACCA GGTGCATGGC
CGGCCCAACG GCACTGCCGG GCAGTACGTG ATCACCTACG GCGACCCACG CACCGTCGGG
CTCAGCGTTA CCAGCCGCTT CTGA
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| Protein sequence | MHQRHPLARQ ISLALLLAGT GSQAIAADEN NKNEPALETV TVTAQHREQT LQEVPVAVSA
IKGTSITADG VRSMGDITTF VPNASAKNPD GDGRPRWYIR GLGTGDTGAA TVYPVGIYAD
DVYLNAPIAG GGPLFDLERI EILRGPQGTL YGKNTTAGAV NVISKKPTFD TDGYGTVGFG
SKNERIVTGA IGGALVDEKL AGRVALYSEE RDGFQNNDFD GNTYGDVNKK AIRLQFLAQL
NPDLDALLKL HSRQFKGDGS NGSLPVGRYY NVGYERPQGR DISLNVNEDY RLDHDGASLT
FNWYLGDYTL TSISAYDYIR NRSTSDADYT PYEVNGAAIT DNSYRQWSQE LRLASPEDRP
LHWLVGAHYF HEDLDSSAQR IVTPGPTPNG TGSNQVGTTA FRDLGYDHRT DSYALFGNLT
YDFTDDFSVT GGLRWTQEKK DIDLDLVQLT RATANGPLIP LGGVGTNGNR QEDKTWEAWT
YDLTPEYRIN DNLRVFFRYA HGFRSGGFNT GLSTSLAQLT TVDPEELDAY ELGLKSEWFD
RRLTVNANLF YYDYSDIQVN LLTVNSGVLT TALTNGAKGK VKGAELEVEG QPTERLHLRA
AVSFLDTEYT DFKNTNPTTG AVTGDYSGNS FVRSPRNVVS LGADYTIPLE VGGKLVAGGD
VSFRDKEYFL ADRQSSADET LSQPHYTLAN ARLSWFSHDD KLSVTGFVNN LTDRRYQVHG
RPNGTAGQYV ITYGDPRTVG LSVTSRF
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