Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3308 |
Symbol | |
ID | 5871093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3712249 |
End bp | 3713763 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548424 |
Product | methane/phenol/toluene hydroxylase |
Protein accession | YP_001669536 |
Protein GI | 167034305 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.899627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCCA AGCGCCTCAA CCAGAAAGAC AAGTACCGCT GCCTGACCCG TGACCTGGGC TGGGAGCCGA GCTACCAGAG CAAGGAAGAC ATCTACCCCT ACGAGCGGTT CGAAGGCATC AAGATCACCG ACTGGGACAA GTGGGAAGAC CCGTTCCGCC TGACCATGGA CGCCTACTGG AAGTACCAGG CCGAAAAAGA AAAGAAGCTG TACGCCATCT TCGATGCCTT TGCCCAGAAC AACGGCCACC AGAACATTTC CGACGCCCGT TATGTCAACG CCCTGAAGTT GTTCCTGAGT GGCGTCACAC CCCTGGAGTA CCAGGCCTAT CAGGGCTTTG CCCGGGTTGG CCGGCACTTT GGCGGTGCCG GCGCACGGGT GGCCTGCCAG ATGCAGGCCA TCGACGAGCT GCGCCACGTG CAGACCCAGG TGCACGCCAT GAGCCACTAC AACAAGCACT TCAACGGCCT GCATGACTTT GCCCACATGC ACGACCGGGT GTGGTTCCTG TCGGTGCCCA AGTCGTTCTT CGAGGATGCC CGCACGGCGG GCCCGTTCGA GTTCCTTACC GCCATTTCGT TCTCGTTCGA GTACGTGCTG ACCAACCTGC TGTTCGTGCC ATTCATGTCG GGTGCGGCAT TCAACGGCGA CATGGCCACG GTCACCTTCG GTTTCTCGGC GCAGTCCGAT GAAGCCCGGC ACATGACCCT GGGCCTGGAG GTGATCAAGT TCCTGCTGGA GCAGCACGAG GACAACGTGC CTATCGTGCA ACGCTGGATC GACAAGTGGT TCTGGCGCGG CTACCGGCTG CTGACCTTGG TCGGCATGAT GATGGACTAC ATGCTGCCAA ACAAAGTGAT GTCCTGGGCC GAAGCCTGGG AGGTGTATTT CGAGGAGGCC GGCGGCGCGC TGTTCAAGGA CCTGGAACGC TATGGCATTC GCCCGCCGAA ATACGTCGAG CAGACCACCA TCGGCAAAGA GCACATCAGC CACCAGGCCT GGTCGATCTT CTACCAGTAC AGCCAGGCCA CCAACTTCCA CACCTGGATC CCTACCGACG AAGAACTGGA CTGGCTGTCG GCCAAGTACC CGGACACCTT CGACCGCTAC TACCGCCCGC GCTACGAGCA TTGGCGCGAA TTGCAGGCGC GCGGTGAGCG CTTCTACAAC CCGACGCTGC CGATGCTGTG CCAGATCTGC CAGATCCCGC TGGCCTTCAC CGAGCCGGAT GCGCCGACGC AATTGAGCCA CCGTAGCCTG GTGCACGAGG GCGAGCGCTA CCACTTCTGC TCCGATGGCT GCTGCGACAT CTTCGCCTTC GAGCCGGACA AGTACGTGCA GGCCTGGTTG CCGGTGCACC AGATCCTGCA GGGCAACTGC GGGGGCGGCG ATGTCGAGTC GGTGGTGCGC GACTACTACA ACATCACCCC CGGCCAGGAC AACTTCGAGT ACCAGGGCTC GCCCGAACAG CAGCGCTGGC AGGCGCTGCA GGGTGCCGAA CGCAAGGTTG TCTGA
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Protein sequence | MAAKRLNQKD KYRCLTRDLG WEPSYQSKED IYPYERFEGI KITDWDKWED PFRLTMDAYW KYQAEKEKKL YAIFDAFAQN NGHQNISDAR YVNALKLFLS GVTPLEYQAY QGFARVGRHF GGAGARVACQ MQAIDELRHV QTQVHAMSHY NKHFNGLHDF AHMHDRVWFL SVPKSFFEDA RTAGPFEFLT AISFSFEYVL TNLLFVPFMS GAAFNGDMAT VTFGFSAQSD EARHMTLGLE VIKFLLEQHE DNVPIVQRWI DKWFWRGYRL LTLVGMMMDY MLPNKVMSWA EAWEVYFEEA GGALFKDLER YGIRPPKYVE QTTIGKEHIS HQAWSIFYQY SQATNFHTWI PTDEELDWLS AKYPDTFDRY YRPRYEHWRE LQARGERFYN PTLPMLCQIC QIPLAFTEPD APTQLSHRSL VHEGERYHFC SDGCCDIFAF EPDKYVQAWL PVHQILQGNC GGGDVESVVR DYYNITPGQD NFEYQGSPEQ QRWQALQGAE RKVV
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