Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3261 |
Symbol | |
ID | 5871046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3658949 |
End bp | 3659776 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548377 |
Product | phosphonoacetaldehyde hydrolase |
Protein accession | YP_001669489 |
Protein GI | 167034258 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01422] phosphonoacetaldehyde hydrolase [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.258798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0791037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTATC AGCAACCCAA GCAACTGCAA GCCGCCATTC TCGACTGGGC CGGCACCGTG GTGGATTTCG GCTCGTTCGC CCCCACCCAG ATCTTTGTCG AGGCCTTTGC CGAGTTCGGC GTGCAGGTCA GCCTGGAAGA AGCCCGCGGG CCCATGGGGA TGGGCAAGTG GGACCACATT CGCACCCTGT GCAATGTGCC GGCCATCGCT GCACGTTACC AGGCCGCCTT CGGCCACACG CCAAGCGACG ACGATGTAAC AGCCATCTAC GAGCGCTTCA TGCCCTTGCA GATCGAGAAG ATCGCCGACC ATTCGGCGCT GATCCCCGGA GCGCTGGAGG CCATCGCCCA GATGCGCCAA CAAGGGCTGA AAATTGGCTC GTGCTCGGGT TACCCGGCGG TGGTGATGGA AAAGGTAGTG GCCCTGGCCT TGCGCAACGG CTACAGCGCC GACCACGTGG TGGCAACCGA CGAGGTACCC AATGGCCGCC CCTACCCCGC GCAGGCACTG GCCAACGTGG TCGCCCTGGG GGTGAGCGAC GTGGCAGCTT GCGTCAAGGT CGACGACACC TGGCCGGGCA TTCTCGAAGG GCGCAGCGCC GGGATGTGGA CCGTGGCCCT GACCTGCTCA GGCAACGCGC TTGGGCTCAC CCATGAGCAG TACAAGGCCC TGCCCGAAGC GGAACTGGAA CAGCAACGCC AGCGCATCGG CAGCCTGTTC GAAGGGTCGC GACCGCATTA CCTGATCGAC ACCATCGCCG AGCTACCCGG GGTAATCGCC GATATCAACG CCCGCCTGGC GCGCGGGGAA ATGCCCCAGA GCCGTTGA
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Protein sequence | MHYQQPKQLQ AAILDWAGTV VDFGSFAPTQ IFVEAFAEFG VQVSLEEARG PMGMGKWDHI RTLCNVPAIA ARYQAAFGHT PSDDDVTAIY ERFMPLQIEK IADHSALIPG ALEAIAQMRQ QGLKIGSCSG YPAVVMEKVV ALALRNGYSA DHVVATDEVP NGRPYPAQAL ANVVALGVSD VAACVKVDDT WPGILEGRSA GMWTVALTCS GNALGLTHEQ YKALPEAELE QQRQRIGSLF EGSRPHYLID TIAELPGVIA DINARLARGE MPQSR
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