Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3250 |
Symbol | |
ID | 5871035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3646149 |
End bp | 3647531 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548366 |
Product | putative aminotransferase |
Protein accession | YP_001669478 |
Protein GI | 167034247 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0885225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC CTTTCGCCCC GCAACGCCAG ACCCGCGACT ACCAGGCAGC CGATGCCGCC CACCACATCC ATGCCTTCCT CGACCAGAAG GCGCTGAACG CCGAAGGGCC ACGGGTGATC GTCGGTGGCG AGCGCCTGCA CCTGTGGGAC AGCGAGGGCA AGCGCTACCT GGATGGCATG TCCGGCCTGT GGTGCACCCA GCTTGGCTAT GGCCGCCGTG ACCTGACTGC CGCCGCCGCC ACGCAGATGG ACCAGCTGGC CTACTACAAC ATGTTCTTCC ACACCACCCA CCCGGCAGTG ATCGAACTGT CCGAGCTGCT GTTCAGCCTG CTGCCAGGGC ACTACAGCCA CGCGATCTAC ACCAACTCCG GCTCCGAGGC CAATGAGGTG CTGATCCGTA CCGTGCGCCG CTACTGGCAG GTGGTCGGCC AGCCCAGCAA GAAGGTCATG ATCGGCCGCT GGAACGGCTA CCACGGCTCG ACCCTGGCGG CTACGGCGCT GGGCGGCATG AAGTTCATGC ACGAAATGGG TGGGCTGATT CCGGACGTGG CGCACATCGA CGAGCCGTAC TGGTACGCCG AGGGTGGCGA GCTGACCCCG GCCGAGTTCG GCCGCCGCTG CGCCCTGCAA CTGGAGGAAA AAATTCTCGA GCTGGGTGCC GAAAACGTTG CCGGCTTCAT TGCCGAACCG TTCCAGGGCG CGGGCGGCAT GATCTTCCCG CCAGAAAGCT ACTGGCCGGA AATCCAGCGC ATCTGCCGCC AGTACGACGT GCTGCTGTGC GCCGATGAAG TGATCGGTGG CTTTGGCCGC ACCGGCGAAT GGTTCGCCCA TGAATACTTC GGCTTCGAGC CCGACACCCT GTCGATTGCC AAAGGCCTGA CCAGCGGCTA TGTGCCAATG GGCGGCCTGG TACTGAGCAA GCGCATTGCC GAGGCGTTGG TGGAGCGTGG CGGGGTGTTC GCCCACGGCC TGACCTATTC CGGCCACCCG GTGGCGGCGG CGGTGGCCAT TGCCAACCTC AAAGCGTTGC GCGACGAAGG CATCGTGCGC CAGGTAAAGG ACGACACCGG GCCGTACCTG CAACGCATCT TGCGTGAGGT GTTCGCCGAT CACCCGTTGA TCGGCCAGGT GCAGGGGGCA GGGTTGGTGG CGGCGCTGCA GTTCGCCGAG CACAAGCCGA CGCGCAAGCG CTTCGTCAAC GAGAACGACC TGGCCTGGCA GTGCCGCACC TTTGGTTTCG AGGAAGGGGT GATCATTCGT TCGACCCTGG GCCGGATGAT CATGGCGCCG GCCTTGATCG CCAACCACAG CGAGCTGGAT GAGCTGGTGG AGAAAACCCG GATTGCCGTT GACCGCACGG CGCGGTTGGT CGGCAAGCTC TAA
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Protein sequence | MNAPFAPQRQ TRDYQAADAA HHIHAFLDQK ALNAEGPRVI VGGERLHLWD SEGKRYLDGM SGLWCTQLGY GRRDLTAAAA TQMDQLAYYN MFFHTTHPAV IELSELLFSL LPGHYSHAIY TNSGSEANEV LIRTVRRYWQ VVGQPSKKVM IGRWNGYHGS TLAATALGGM KFMHEMGGLI PDVAHIDEPY WYAEGGELTP AEFGRRCALQ LEEKILELGA ENVAGFIAEP FQGAGGMIFP PESYWPEIQR ICRQYDVLLC ADEVIGGFGR TGEWFAHEYF GFEPDTLSIA KGLTSGYVPM GGLVLSKRIA EALVERGGVF AHGLTYSGHP VAAAVAIANL KALRDEGIVR QVKDDTGPYL QRILREVFAD HPLIGQVQGA GLVAALQFAE HKPTRKRFVN ENDLAWQCRT FGFEEGVIIR STLGRMIMAP ALIANHSELD ELVEKTRIAV DRTARLVGKL
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