Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2973 |
Symbol | |
ID | 5870758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3325595 |
End bp | 3325978 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641548089 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001669201 |
Protein GI | 167033970 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.947385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.597443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTG ATAACGGCAC GGTGCTGGCG ACTGTCGCAC TGAAAACAAC CGGGCGCCTC AAACTGTGGC AACTCGCAAC GGCCAAAAGG TTGATGATGG AGAATCTGGA CACCGGCATT ACCGTTACCG AGATCGCCGA GGCTTGCGCG CTGACACGCA GCCATTTCAC GCGCATGTTC AGAGAAACCG AGCAGGTGCC CCCGCAGCAG TGGATGCGTG AGCAACGGTT GCGGAAAAGC AAAGAACTTC TCGAAGGCTC GGGAATGATG CTCGCAGAAA TTGCACTGGA GTGCGGCTTC TGCGACCAGT CACACTTCTG TAGGACGTTT GTGAAGGCCG AGGGGATATC GCCACAGGCC TGGCAGCGAC AAGCATCTTT TTAA
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Protein sequence | MISDNGTVLA TVALKTTGRL KLWQLATAKR LMMENLDTGI TVTEIAEACA LTRSHFTRMF RETEQVPPQQ WMREQRLRKS KELLEGSGMM LAEIALECGF CDQSHFCRTF VKAEGISPQA WQRQASF
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