Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2967 |
Symbol | |
ID | 5870752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3321141 |
End bp | 3321866 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641548083 |
Product | hypothetical protein |
Protein accession | YP_001669195 |
Protein GI | 167033964 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTACA TAGGGTGCGC CGGCTGGAGC CTGTCACGGC CCTCCCTGGA TGAGTTTCCC CTTTCGGGTA GTCACTTGCA GCGTTACGCG ACTCGCCTCA ACGCAGTAGA GATCAATAGT TCTTTCTATC GACTGCATCG GCCCGAGACC TATGCTCGGT GGGCCGCGTC GGTGCCAGAA GGTTTCAGAT TCTCGGTCAA GGCGCCGCAG ACCATCACCC ACGAATGTCG GTTGATGAAT TGTGAGGCAC CGCTGAAGGC ATTTCTAGAG CAGTGCAGCC AGCTCGAAGG CCGGCTGGGT TGCATTCTGC TGCAGTTACC ACCGTCACTG GAGTATGGAG CAAAAATTGC TCAGAACTTT TTTGAGCTAA TGCGCAAGCA CTACTCGGGG CCACTGGCGC TAGAACCTCG GCATTCATCC TGGCGGGATG CAGACACTAC ATTGTCGGCA TTTCAAATCG CCCAGGTAGG CGCGAGTCCA CCCCGTTTCG GTGATGATGA GCAGCCCAGT GGTTGGCCAG GCATGGTGTA TTGGAGACTG CATGGAGTCC CCCGGATTTA CCACAGTTCA TACCCGCAAG AGTATCTGCA GCGCTTGTTG GAACGGCTCG AAGTAAGTAG TGCCAAGAAT GTGCCCACCT GGTGCATCTT CGACAACACA ACGTCCGGAG CTGCGTTATG CAACGCGCTT TTGATGCAGG CATTCCTCAA CCCTGGCCAA GCCTGA
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Protein sequence | MIYIGCAGWS LSRPSLDEFP LSGSHLQRYA TRLNAVEINS SFYRLHRPET YARWAASVPE GFRFSVKAPQ TITHECRLMN CEAPLKAFLE QCSQLEGRLG CILLQLPPSL EYGAKIAQNF FELMRKHYSG PLALEPRHSS WRDADTTLSA FQIAQVGASP PRFGDDEQPS GWPGMVYWRL HGVPRIYHSS YPQEYLQRLL ERLEVSSAKN VPTWCIFDNT TSGAALCNAL LMQAFLNPGQ A
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