Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_2892 |
Symbol | |
ID | 5870678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3247395 |
End bp | 3248207 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548010 |
Product | exonuclease III |
Protein accession | YP_001669122 |
Protein GI | 167033891 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0279312 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCG TCTGTTTCAA CATCAACGGC CTGCGGGCCC GCCCGCACCA GCTGGCGGCG CTGATCGAAA AGCACCAGCC GGACGTGATC GGCCTGCAGG AAACCAAGGT CAGCGACGAT CAGTTCCCGC TGGCCGACGT GCAGGCACTG GGCTACCACG TGCACTACCA TGGCCAGAAA GGCCACTACG GCGTGGCGCT GCTGTCGCGC CAGGCGCCGC TGAGCCTGCA CAAAGGCTTT GCCACCGATG AAGACGACGC CCAGCGCCGC TTTATCTGGG GCACCTTCCC TGATGCCGAC GGCAACCCGA TCACCATCAT GAACGGCTAT TTCCCCCAGG GTGAAAGCCG CGACCACCCC ACCAAGTTCC CGGCCAAGCA GCGCTTCTAC AGCGACCTGC AGGCCCTGCT CGAAGGCCAG TTCCGCAACG ACCAGCCACT GCTGGTGATG GGCGACATGA ACATCTCGCC GCAGGACTGC GATATCGGCA TCGGTGCGGA CAACGCCAAG CGCTGGCTGA AGACCGGCAA GTGCAGCTTC CTGCCGGAAG AGCGCGAGTG GATGGAACGC TTGAAAGGCT GGGGCCTTGT CGATAGTTTC CGTCACCTGT ACCCGGAGGT GACGGACCGC TTCAGCTGGT TCGACTACCG CAGCCGCGGC TTCGAGGACG ACCCCAAGCG CGGGCTGCGC ATCGACCTGA TCATGGCCTC GCAGCATCTG GTGCCACGCA TCAAGGCAGC AGGTGTGGAC TATGAACTGC GCGCAATGGA AAAGCCGTCG GACCATGCGC CGATCTGGCT GGAATTGAGC TGA
|
Protein sequence | MKIVCFNING LRARPHQLAA LIEKHQPDVI GLQETKVSDD QFPLADVQAL GYHVHYHGQK GHYGVALLSR QAPLSLHKGF ATDEDDAQRR FIWGTFPDAD GNPITIMNGY FPQGESRDHP TKFPAKQRFY SDLQALLEGQ FRNDQPLLVM GDMNISPQDC DIGIGADNAK RWLKTGKCSF LPEEREWMER LKGWGLVDSF RHLYPEVTDR FSWFDYRSRG FEDDPKRGLR IDLIMASQHL VPRIKAAGVD YELRAMEKPS DHAPIWLELS
|
| |