| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2889 |
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| Symbol | |
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| ID | 5870675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3241116 |
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| End bp | 3244790 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548007 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669119 |
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| Protein GI | 167033888 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.224565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACGCG TGATCAAATA CATTCTGCTG GGCCTGCTTG GGGTAGTCGC GAGCTTGGGC
CTGGCACTGG GCCTGCTGCT GGGTACCGAG GCTGGTAGCC GCTGGGCACT GGGCAAGGTG
CCCGGGCTCG AAGTGGCCGA TTTCCAAGGG CGCCTTGCGG GCAGTTGGCA AGCTAGCCAG
CTGATCTGGG CCGACGCCGG CAGCAAGGTA GAGGTGCAGG CGCCGATGCT GGCTTGGTCG
CCTGCTTGCT TGCTACGCGC CACGTTGTGC ATCGACCGGT TGCAGGCCGA ACGCATCGAC
ATGGGCTTTG CGCCAAGCCC CGAACCCACC GACAACGCAC CGCTGCAATT GCCGACCCTG
CGCTTGCCAC TGGCTATCGA GCTGGGCGAG GTCAAGGTTG GTCAGCTGCG CCTGGATGGC
AGCGAACTGC TTGGCGACTT GCAGCTCGCG GCGCACTGGA CCAACAGCGG GATGCGCATC
GACAGCCTGC GGCTGCAGCG CGACGACCTG AATTTGAACC TGCAAGGCGA CCTGCAGCCC
GAAGGTGACT GGCCGCTGCA ACTGCAGGCG CAACTGCAGT TGCCTGCGGT AGAGGGCAAG
CCTTGGCAGC TGGCACTGAC TGCCAGCGGT GAATTGCAAA AAACCCTGAA ACTGGCTGGC
AGCAGCAGTG GTTACCTCGA TGCCACGCTG AGCGGCCAAT TGCAGGCATT GGCCGAACAC
CTGCCAGCTA CCTTGCAGAT CCGCTCCGAG GCATTCAAGC CGGCTGGCAC GTTGCCCGAC
ACTTTGCAGC TGAACCAGCT GAAGCTCGAC GCCCAGGGCG ATTTGCTCAA GGGCTATCAC
CTGTCGGGCA CGGCCAGCCT GCCCGCCGAA CAATCGCCGA TCGCCCTGGC CTTGTCCGGG
TTGGTGGACA GTAAAGGCGC CAGGCTCGAT GCCTTGGACC TGACCGCCAA CGACAACCAA
CGGGTCAAGT TGCAAGCGAC GGCTGACTGG CAGCAAGGCC TGAGCGCCGA TGCGCAGCTG
GACTGGCAGG ATTTCCCGTG GTTGCGCCTG TACCCCTTGG AGACTCCGCC TGAGGTCACC
CTCAAGCGCT TCAATACCCA GGTGCATTAT CGCGATGGCA ATTACCAGGG CACCTTCAAG
GGTGAGCTGG ACGGCCCGGC GGGGGCGTTC AGCCTGGCCA GCCCGTTCGA AGGCGACCTG
AGCCAGGTGA AACTGCCACA GTTGGCGCTG ACTGCCGGCC AGGGCAAGGC CGCCGGCAGT
GTCGCCGTGC GTTTTGCCAA CACGCTGGCC TGGGATGTCG ACTTGCAGCT TTCCGCGCTC
GATCCGGCCT ATTGGCTGGC CGAGCTACCG GGCACCCTGG CGGGGCCACT GCGCAGCAAA
GGCGAGCTCA AAGGCGAGGC GCTTACCCTC GATGCCCAGC TCGACCTTAA AGGCCGCCTG
CGTGGCCAGC CAGCCGTACT CAAGGCCGAA GCCCAGGGGG CAGGGCAAAA CTGGACCCTG
GGCGCACTGG CTATCCAGCT GGGTGACAAC CGCATCAACG GCAGTGGCAG CCTGCAACAA
CGGCTGGCCG GGCGAATCGA CATCGACTTG CCGCGCCTGG GCCAGTTGTG GCCGAGGCTG
CAAGGGCAGG TCAAGGGGCG GCTGGATGTC GCCGGGACGC TGCAGGCTCC GCAAGGTACC
CTGACCTTGC AAGGTCAGCG CTTGGCCCAG GCCGAAAACC GCCTGCAGCA GCTGGACCTG
GAGGCGCGCC TGGACAACGC TCAACGCGGC GTTGTCGAGC TCAAGGCCAC AGGTATTCAC
CTGGGTGACA CGGCCTTGGG CACGCTGCAG GCCAACGGCA AAGGCGACAT TCGCCAACAG
GCCGTGACTC TGGCGTTGGA CGGCCCGCAA CTCAAGCTCG ACCTTGGCCT GGATGGCCAG
TTGAACAAGG GTGACTGGCG TGGTCGTCTG GCCAGCGGGC GGATTCAGGC CGGCGGCCAG
GATTGGCAGT TGCAGGCCCC GGCACGCCTG CAGCGGCTGG CCAGCGGTCA GCTGGATTTC
GGGGCCCACT GCTGGCGCTC CGGGCAGGCC AGCCTGTGTG GCGAGGACCA GCGCCTGGCC
CCCGAGCCCC GCCTGCGCTA CCACCTCAAG CAGTTCCCGC TGGACAGCCT GGCCCAGTGG
CTGCCGAAGG ACTTTGCCTG GCAAGGCCTG CTCAATGCCG ATATCAACTT GGACATCCCG
GCCAGCGGCC CCAAGGGTAC TGTCGTTGTC GATGCCAGTG GCGGCACCCT GCGGGTACGC
GACAAGGGCC GCTGGATCGA CTTCCCGTAT CAGGCCCTGC GCCTGGACAG CACGCTGGCA
CCGCGACGCA TCGATACGCG CCTGGCGTTT CGCGGTGAGC GTCTGGGGGA ACTGAGCGTC
AACGCCCGGC TCGATCCGCT AGGCAAGAAC AAGCCATTGT CGGGTGATTT CCGCCTGGCC
GGGCTAGACC TGTCGGTGGC CCGTCCGTTT GTGCCGATGG TCGAACGCCT GGCTGGGCAG
CTCAATGGCA GTGGCCGGCT TTCAGGTACT TTGCTGGCGC CGCAGGTCAA CGGTAACCTG
ATGCTCAGCG GTGGTGAAGT CAGTGGTGCA GAGCTGCCGG CCAGCCTGCA GGACCTGTCA
CTGCAGGCAC TGATCAGCGG TGAGCAGGTG CAGCTCAACG GCAATTGGCG CAGTGGCGAG
GCTGGGCGTG GGCAGTTGAG CGGCAACCTC ACCTGGGGCC AGGCGTTGGG CATGGACGTG
CGTTTGCAAG GCCAGCAACT GCCGGTCACG GTCGAGCCCT ATGCCGCACT GGAGGTGGCC
CCAGACCTTA CCTTGCGCCT GATCGACGAC AAGCTGGCGG TGACCGGCAA GGTTCAGGTG
CCCAAGGGCA AGATCACCGT CCGCGAGCTG CCGCCGTCCA CCGTCAAGGT GTCGGATGAC
ACGGTAATCG TCGGTCACCA GACCGAAGAG GGCAAACCGC CCATGGCGAT GGCCATGGAC
ATCGACGTCG AAGTGGGCCA GGACAAGCTG TCGTTCAGCG GCTTTGGCCT TACCGCCAAC
CTGCTTGGCC ATGTGCACAT TGGTGATAAC CTCGACACCC GTGGCGAGCT GAGCCTGGCA
GACGGCCGCT ACCGTGCCTA CGGTCAACGC TTGACCATCC GCCGAGCGCG GCTGCTGTTC
GCCGGCCCAA TCGACCAGCC GTACCTGGAC ATCGAAGCAA TCCGCAAGGT TGACGATGTG
ATTGCTGGTA TCCGCCTGAG CGGCAGCGCC GAACAGCCCA CCACGAAGGT GTTCTCGGAG
CCGGCCATGA GCCAGGAGCA GGCGCTGTCG TACCTGGTAC TGGGGCGGCC ATTGGGCACC
TCCGGCGAAG ACAACAACAT GCTCGCCGAG GCGGCCTTGG GCTTGGGGCT GGCCGGCAGT
GCCGGCATTA CCGGCAGCCT GGCGTCGAGC CTGGGTATCG ACGACTTCCA GTTGGATACC
GAAGGGTCGG GCAACAGCAC CAGCGTGGTC GCCAGCGGCA ACCTGACTGA AAAGCTGAGC
CTGCGTTACG GGGTAGGGGT GTTCGAACCC GCCAACACCA TCGCCTTGCG TTACAAGTTG
AGCAAGAAGG TCTACCTTGA AGCCGCCAGC GGGCTGGCGA GTTCACTGGA TATCTTCTAC
AAACGCGACT TCTAG
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| Protein sequence | MKRVIKYILL GLLGVVASLG LALGLLLGTE AGSRWALGKV PGLEVADFQG RLAGSWQASQ
LIWADAGSKV EVQAPMLAWS PACLLRATLC IDRLQAERID MGFAPSPEPT DNAPLQLPTL
RLPLAIELGE VKVGQLRLDG SELLGDLQLA AHWTNSGMRI DSLRLQRDDL NLNLQGDLQP
EGDWPLQLQA QLQLPAVEGK PWQLALTASG ELQKTLKLAG SSSGYLDATL SGQLQALAEH
LPATLQIRSE AFKPAGTLPD TLQLNQLKLD AQGDLLKGYH LSGTASLPAE QSPIALALSG
LVDSKGARLD ALDLTANDNQ RVKLQATADW QQGLSADAQL DWQDFPWLRL YPLETPPEVT
LKRFNTQVHY RDGNYQGTFK GELDGPAGAF SLASPFEGDL SQVKLPQLAL TAGQGKAAGS
VAVRFANTLA WDVDLQLSAL DPAYWLAELP GTLAGPLRSK GELKGEALTL DAQLDLKGRL
RGQPAVLKAE AQGAGQNWTL GALAIQLGDN RINGSGSLQQ RLAGRIDIDL PRLGQLWPRL
QGQVKGRLDV AGTLQAPQGT LTLQGQRLAQ AENRLQQLDL EARLDNAQRG VVELKATGIH
LGDTALGTLQ ANGKGDIRQQ AVTLALDGPQ LKLDLGLDGQ LNKGDWRGRL ASGRIQAGGQ
DWQLQAPARL QRLASGQLDF GAHCWRSGQA SLCGEDQRLA PEPRLRYHLK QFPLDSLAQW
LPKDFAWQGL LNADINLDIP ASGPKGTVVV DASGGTLRVR DKGRWIDFPY QALRLDSTLA
PRRIDTRLAF RGERLGELSV NARLDPLGKN KPLSGDFRLA GLDLSVARPF VPMVERLAGQ
LNGSGRLSGT LLAPQVNGNL MLSGGEVSGA ELPASLQDLS LQALISGEQV QLNGNWRSGE
AGRGQLSGNL TWGQALGMDV RLQGQQLPVT VEPYAALEVA PDLTLRLIDD KLAVTGKVQV
PKGKITVREL PPSTVKVSDD TVIVGHQTEE GKPPMAMAMD IDVEVGQDKL SFSGFGLTAN
LLGHVHIGDN LDTRGELSLA DGRYRAYGQR LTIRRARLLF AGPIDQPYLD IEAIRKVDDV
IAGIRLSGSA EQPTTKVFSE PAMSQEQALS YLVLGRPLGT SGEDNNMLAE AALGLGLAGS
AGITGSLASS LGIDDFQLDT EGSGNSTSVV ASGNLTEKLS LRYGVGVFEP ANTIALRYKL
SKKVYLEAAS GLASSLDIFY KRDF
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