| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2762 |
|---|
| Symbol | |
|---|
| ID | 5870548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3097315 |
|---|
| End bp | 3098802 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641547880 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001668992 |
|---|
| Protein GI | 167033761 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.517827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.443449 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTT TAGCTAACGT CCCTAGCTGG AGTGACATCG AGCGCAGCCT CGATCAGAAA
TTCAGCGCGG TGAACCAGAG CATCCACCAG GGGCTGCAGA GCGCCAATGA CAGCTGGCAC
GGTTTCTCTC GGCGCGTTAG TGATGGCGCC GGCCAAGCCT ATGGCTACCT GGGTGGCCAT
CGCATCGACA ATGTGCAACA GGCACTGGCG ATGTCGTATC CGATCTTCCA GGAAGACCTC
AAGCGCAAAT GGGCTTCGAT CGGTATCGAA CAGATTTTGC CGGTGCTGCT GCAACTGGTG
AAGGAAGTGT CGATGATCCT CGGTGGGAGT ATTGCCGTGG GCTCTGCTGC AGGCGGTGCG
ATCGGTGCTT TGGCCTTTGG CGTCGGCGCG GCGCCCGGCG CCGTGGCAGG GGCGGGCATC
GGTCTGGAGG TCGGTAACCT GATCCTTCTT GCGTTGGGCC TGTCGGCGAT CGCCGAATAC
TTCATCAAAG GGCTGCCGGT TTGCCTGGCC ACTCTTCAGG AGGGTATCGC TACGGCCTGG
AATGCCGAAG AAGGCGTCAA GCCTGCCGGG CTGGACCCTA CTGGAGGGTC GGTGGCCGTT
ATCCAGGAGC GAACCGAACG CGCCGCGCGG CAGCTGGCCC GCGGGCAGGA ACAGCTGGTG
TTGTTGTTAC TGATGGCCAT CGTCACCTAC CTGCTGCGCG GACAGATGAA GGCCGGCATC
ATGGGCAGCA TGGAGAACAT TGCCACGCGC AGTGCCAAGC TGCAGGCCGA CATTGCCAAC
AAGCAGTTTG GTGCCTGGCT TGCCAAGAAC GAAGCCAAGC TGCTGGCTCA CCCAGACCTG
CAGATCAAGG GCCCCACCCC CGTCAAGAAA CCTGAGCCGC TGCAGCCCGC TCGTCAACCG
GAAAAAGCCT CGGCACCGAA GCCTGTAGCA AAACCGGCAG TCATGTCTTT GCGAGAAGCC
GTGGGCAATC AGACTGCAGA CCGCTGGATA TCCACGGGCA GGCGCATCGC CGACTTCACC
GACCCTAAGC GTTCAGCCTT GCTCACGGAC GATCAGATCG GCGCGCTGCA TGGCTACACC
ACCAACGAAG GCTATCAGTG GATCAACCCG GCGCTGCGCG GGCAGACCCC GCTTAGCCCG
CAGATGGAGG CCTTCGTCAC GCATGCCAAC GAAGGCCTCG CAAAGCTACC GTCCTACACG
TTGGGGGATA CCTTCCGCGG TACTACGTTG CCGGAGGATG TCATGTCGAG GATGCAAGTC
GGTCTGCCAA CCAGTGATGC AGCGTTCCTG AGTACTTCTG CAGACCGTGC CCTGGCATTC
AACGGTAATG TGAAGATGAC CTTGCAGGGC GTGACTGGCA AAGATATCAG CTTTCTGTCT
GGCCACAGGG AAGCTGAGGT ATTGTTTGGG CCAGGCACGC GCTTCAATGT TGTCGACAGG
GTCGACAATG GCTCCGTCAC TCAATTTATT CTCAAAGAAA TCCCATGA
|
|---|
| Protein sequence | MDLLANVPSW SDIERSLDQK FSAVNQSIHQ GLQSANDSWH GFSRRVSDGA GQAYGYLGGH
RIDNVQQALA MSYPIFQEDL KRKWASIGIE QILPVLLQLV KEVSMILGGS IAVGSAAGGA
IGALAFGVGA APGAVAGAGI GLEVGNLILL ALGLSAIAEY FIKGLPVCLA TLQEGIATAW
NAEEGVKPAG LDPTGGSVAV IQERTERAAR QLARGQEQLV LLLLMAIVTY LLRGQMKAGI
MGSMENIATR SAKLQADIAN KQFGAWLAKN EAKLLAHPDL QIKGPTPVKK PEPLQPARQP
EKASAPKPVA KPAVMSLREA VGNQTADRWI STGRRIADFT DPKRSALLTD DQIGALHGYT
TNEGYQWINP ALRGQTPLSP QMEAFVTHAN EGLAKLPSYT LGDTFRGTTL PEDVMSRMQV
GLPTSDAAFL STSADRALAF NGNVKMTLQG VTGKDISFLS GHREAEVLFG PGTRFNVVDR
VDNGSVTQFI LKEIP
|
|---|
| |